STRINGSTRING
F20D22.6 protein (Arabidopsis thaliana) - STRING interaction network
"F20D22.6" - Protein synthesis initiation factor eIF2 gamma in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F20D22.6Protein synthesis initiation factor eIF2 gamma (465 aa)    
Predicted Functional Partners:
AT2G40290
Eukaryotic translation initiation factor 2 subunit 1 (344 aa)
     
  0.999
At5g05470
Translation initiation factor eIF-2 alpha subunit (344 aa)
     
  0.998
RPS6A
Ribosomal protein S6; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (250 aa)
 
  0.998
EMB3010
Embryo defective 3010; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (249 aa)
 
  0.998
EMB1401
Protein synthesis initiation factor eIF2 beta; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by e [...] (268 aa)
     
  0.998
AT5G01940
Translation initiation factor eIF-2 beta subunit (231 aa)
     
  0.997
AT3G07920
Translation initiation factor IF2/IF5 (164 aa)
     
  0.997
EIF3A
Eukaryotic translation initiation factor 3A; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome (987 aa)
     
  0.997
AT1G77840
Translation initiation factor eIF-5; Catalyzes the hydrolysis of GTP bound to the 40S ribosomal initiation complex (40S.mRNA.Met-tRNA[F].eIF-2.GTP) with the subsequent joining of a 60S ribosomal subunit resulting in the release of eIF-2 and the guanine nucleotide. The subsequent joining of a 60S ribosomal subunit results in the formation of a functional 80S initiation complex (80S.mRNA.Met-tRNA[F]) (By similarity) (437 aa)
     
  0.997
AT2G32060
40S ribosomal protein S12-2 (144 aa)
   
  0.997
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (13%) [HD]