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AT1G04290 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G04290" - Thioesterase superfamily protein in Arabidopsis thaliana
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
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gene co-occurrence
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textmining
co-expression
protein homology
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AT1G04290Thioesterase superfamily protein; Its function is described as hydrolase activity, acting on ester bonds, acyl-CoA thioesterase activity; Involved in biological_process unknown; Located in peroxisome; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Thioesterase superfamily (InterPro-IPR006683), Phenylacetic acid degradation-related protein (InterPro-IPR003736); BEST Arabidopsis thaliana protein match is- Thioesterase superfamily protein (TAIR-AT2G29590.1); Has 964 Blast hits to 962 proteins in 292 species- Archae - 38; Bacte [...] (155 aa)    
Predicted Functional Partners:
AT5G23690
Polynucleotide adenylyltransferase family protein; Its function is described as RNA binding, nucleotidyltransferase activity; Involved in RNA processing; Expressed in 20 plant structures; Expressed during 12 growth stages; Contains the following InterPro domains- Poly A polymerase, head domain (InterPro-IPR002646); BEST Arabidopsis thaliana protein match is- polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein (TAIR-AT3G48830.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 34 [...] (527 aa)
     
      0.483
AT3G48830
Polynucleotide adenylyltransferase family protein / RNA recognition motif (RRM)-containing protein; Its function is described as polynucleotide adenylyltransferase activity, RNA binding, nucleotide binding, nucleic acid binding, nucleotidyltransferase activity; Involved in RNA processing; Located in endomembrane system; Expressed in 12 plant structures; Expressed during 7 growth stages; Contains the following InterPro domains- RNA recognition motif, RNP-1 (InterPro-IPR000504), Poly A polymerase, head domain (InterPro-IPR002646), Nucleotide-binding, alpha-beta plait (InterPro-IPR012677) [...] (881 aa)
     
      0.483
AT2G17580
Polynucleotide adenylyltransferase family protein; Its function is described as RNA binding, nucleotidyltransferase activity; Involved in RNA processing; Located in chloroplast; Expressed in 16 plant structures; Expressed during 8 growth stages; Contains the following InterPro domains- Poly A polymerase, head domain (InterPro-IPR002646); BEST Arabidopsis thaliana protein match is- Polynucleotide adenylyltransferase family protein (TAIR-AT1G28090.2); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses [...] (757 aa)
     
      0.483
AT1G28090
Polynucleotide adenylyltransferase family protein; Its function is described as RNA binding, nucleotidyltransferase activity; Involved in RNA processing; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Poly A polymerase, head domain (InterPro-IPR002646); BEST Arabidopsis thaliana protein match is- Polynucleotide adenylyltransferase family protein (TAIR-AT5G23690.1); Has 9340 Blast hits to 9332 proteins in 2600 species- Archae - 2; Bacteria - 6572; Metazoa - 129; Fungi - 227; Plants - 12 [...] (541 aa)
     
      0.483
AT1G22660
Polynucleotide adenylyltransferase family protein; Its function is described as tRNA adenylyltransferase activity, RNA binding, nucleotidyltransferase activity; Involved in tRNA processing, RNA processing; Located in mitochondrion; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Poly A polymerase, head domain (InterPro-IPR002646); BEST Arabidopsis thaliana protein match is- Polynucleotide adenylyltransferase family protein (TAIR-AT2G17580.1); Has 8643 Blast hits to 8635 proteins in 2546 species- Archae - 2; Bacteria - 6091; [...] (605 aa)
     
      0.483
NIC2
Nicotinamidase 2; Catalyzes the deamidation of nicotinamide, an early step in the NAD(+) salvage pathway. Prevents the accumulation of intracellular nicotinamide, a known inhibitor of poly(ADP-ribose) polymerases (PARP enzymes). May play a role in the regulation of seed germination potential (198 aa)
   
 
  0.482
NIC3
Nicotinamidase 3; Catalyzes the deamidation of nicotinamide, an early step in the NAD(+) salvage pathway. Prevents the accumulation of intracellular nicotinamide, a known inhibitor of poly(ADP-ribose) polymerases (PARP enzymes) (198 aa)
   
 
  0.482
AT1G11800
Endonuclease/exonuclease/phosphatase family protein; Its function is described as hydrolase activity, zinc ion binding; Located in intracellular; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Endonuclease/exonuclease/phosphatase (InterPro-IPR005135), Zinc finger, RanBP2-type (InterPro-IPR001876); Has 386 Blast hits to 366 proteins in 96 species- Archae - 0; Bacteria - 14; Metazoa - 170; Fungi - 14; Plants - 104; Viruses - 0; Other Eukaryotes - 84 (source- NCBI BLink) (441 aa)
           
  0.477
PAHX
phytanoyl-CoA dioxygenase (PhyH) family protein; Converts phytanoyl-CoA to 2-hydroxyphytanoyl-CoA; Belongs to the PhyH family (283 aa)
           
  0.474
AT1G24050
RNA-processing, Lsm domain; Contains the following InterPro domains- RNA-processing, Lsm domain (InterPro-IPR019181); BEST Arabidopsis thaliana protein match is- RNA-processing, Lsm domain (TAIR-AT1G70220.1); Has 228 Blast hits to 228 proteins in 109 species- Archae - 0; Bacteria - 0; Metazoa - 90; Fungi - 53; Plants - 56; Viruses - 0; Other Eukaryotes - 29 (source- NCBI BLink) (188 aa)
     
      0.472
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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