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AT1G04340 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G04340" - HR-like lesion-inducing protein-related in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G04340HR-like lesion-inducing protein-related (159 aa)    
Predicted Functional Partners:
PORC
Protochlorophyllide reductase C; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) (401 aa)
       
      0.856
NAC089
NAC domain containing protein 89; Transcription factor involved in plant cell division (340 aa)
       
      0.588
NLM1
Aquaporin NIP1-1; Water channel probably required to promote glycerol permeability and water transport across cell membranes (296 aa)
       
      0.588
VAP27-1
Vesicle associated protein; Part of a membrane-cytoskeletal adapter complex that forms a bridge between the endoplasmic reticulum and the plasma membrane. Associates with microtubules (256 aa)
       
      0.588
AT3G50910
Uncharacterized protein (447 aa)
       
      0.588
AT3G16310
Nuclear pore complex protein Nup53 (329 aa)
       
      0.588
AT1G27300
Uncharacterized protein (200 aa)
       
      0.588
ATI2
Uncharacterized protein; May be involved in salt stress-induced vesicle-to- vacuole trafficking pathway. Through its interaction with ATG8F, may enable delivery of the vesicle bodies to the vacuole by an autophagic pathway (Probable). Plays a role in seed germination in response to exogenous abscisic acid (ABA) treatment (PubMed-22253227) (266 aa)
       
      0.540
AT4G14420
HR-like lesion-inducing protein-related (158 aa)
     
     
0.444
AT4G08520
Coatomer subunit zeta-3; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (By similarity) (181 aa)
     
        0.430
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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