STRINGSTRING
AT1G04420 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G04420" - NAD(P)-linked oxidoreductase-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G04420NAD(P)-linked oxidoreductase-like protein (412 aa)    
Predicted Functional Partners:
AT3G06460
GNS1/SUR4 membrane-like protein (298 aa)
           
  0.956
KCS4
3-ketoacyl-CoA synthase 4 (516 aa)
           
  0.830
KCS9
3-ketoacyl-CoA synthase 9; Involved in the elongation of C22 to C24 fatty acids, which are precursors for the biosynthesis of cuticular waxes, aliphatic suberins, and membrane lipids, including sphingolipids and phospholipids (512 aa)
           
  0.804
AT4G02530
Chloroplast thylakoid lumen protein (216 aa)
     
        0.752
PSRP2
RNA recognition motif-containing protein (253 aa)
     
        0.752
emb1473
Embryo defective 1473 (241 aa)
     
        0.747
AT5G47190
50S ribosomal protein L19-2; Located at the 30S-50S ribosomal subunit interface and binds directly to 23S ribosomal RNA (229 aa)
     
   
  0.716
AT4G01310
50S ribosomal protein L5; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit (262 aa)
     
        0.713
AT2G43560
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity) (223 aa)
   
        0.711
KCR2
Beta-ketoacyl reductase 2; Probable reductase, but unlike KCR1, has no beta- ketoacyl-coenzyme A reductase activity (312 aa)
         
  0.702
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (8%) [HD]