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AT1G04445 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G04445" - C2H2-like zinc finger protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G04445C2H2-like zinc finger protein (172 aa)    
Predicted Functional Partners:
AT1G31660
Putative bystin (444 aa)
       
 
  0.871
AT3G51270
RIO kinase 2 (461 aa)
     
 
  0.785
AT1G42440
Uncharacterized protein (793 aa)
     
 
  0.692
DDB1B
DNA damage-binding protein 1b; Component of light signal transduction machinery. Involved in repression of photomorphogenesis in darkness (By similarity). Plays a role in DNA repair by forming with DDB2 the UV-damaged DNA-binding protein complex (UV-DDB) (By similarity) (1088 aa)
     
      0.691
DDB1A
DNA damage-binding protein 1a; Component of light signal transduction machinery. Involved in repression of photomorphogenesis in darkness by participating in the CDD complex, a complex probably required to regulate the activity of ubiquitin conjugating enzymes (E2s). Repression of photomorphogenesis is probably mediated by ubiquitination and subsequent degradation of photomorphogenesis- promoting factors such as HY5, HYH and LAF1. Plays a role in DNA repair by forming with DDB2 the UV-damaged DNA-binding protein complex (UV-DDB). Component of the CUL4-RBX1-DDB1-PRL1 E3 ubiquitin-protei [...] (1088 aa)
     
      0.691
AT3G49990
Uncharacterized protein (502 aa)
       
 
  0.654
AT5G59950
RNA recognition motif-containing protein; Export adapter involved in nuclear export of spliced and unspliced mRNA (245 aa)
       
      0.614
ALY4
ALWAYS EARLY 4; Export adapter involved in nuclear export of spliced and unspliced mRNA (288 aa)
       
      0.614
AT5G02530
THO complex subunit 4; Export adapter involved in nuclear export of spliced and unspliced mRNA (292 aa)
       
      0.614
AT1G66260
RNA recognition motif-containing protein; Export adapter involved in nuclear export of spliced and unspliced mRNA (295 aa)
       
      0.614
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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