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AT1G04500 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G04500" - CCT motif family protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G04500CCT motif family protein (386 aa)    
Predicted Functional Partners:
AT2G33350
CCT motif family protein (410 aa)
     
     
0.438
MAP65-9
Microtubule-associated protein 65-9 (549 aa)
     
        0.437
AT5G39870
Uncharacterized protein (290 aa)
     
        0.437
RALFL20
RALF-like 20; Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity) (72 aa)
     
        0.437
AT2G22807
Putative defensin-like protein 190 (93 aa)
     
        0.437
AT1G04890
Uncharacterized protein (411 aa)
     
        0.437
GNL2
GNOM-like 2; Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Essential for pollen germination (1375 aa)
     
        0.436
AT4G33390
Uncharacterized protein (779 aa)
     
        0.436
AT4G13230
Late embryogenesis abundant domain-containing protein (120 aa)
     
        0.436
AT3G51070
Putative methyltransferase PMT27 (895 aa)
     
        0.436
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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