STRINGSTRING
AT1G04590 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G04590" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G04590Uncharacterized protein (384 aa)    
Predicted Functional Partners:
AT5G40600
Uncharacterized protein (325 aa)
     
   
  0.654
EMB1401
Protein synthesis initiation factor eIF2 beta; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. This complex binds to a 40S ribosomal subunit, followed by mRNA binding to form a 43S preinitiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF-2 and release of an eIF-2-GDP binary complex. In order for eIF-2 to recycle and catalyze another round of initiation, the GDP bound to eIF-2 must exchange with GTP by way of a reaction catalyzed by e [...] (268 aa)
     
   
  0.631
emb1353
Protein embryo defective 1353 (388 aa)
           
  0.630
emb2204
Embryo defective 2204; May be involved in embryogenesis (329 aa)
           
  0.630
MEE22
MATERNAL EFFECT EMBRYO ARREST 22 (1297 aa)
     
   
  0.619
EMB2423
EMBRYO DEFECTIVE 2423 (1027 aa)
     
   
  0.612
EMB1793
EMBRYO DEFECTIVE 1793 (157 aa)
           
  0.602
emb1441
Embryo defective 1441 (1080 aa)
           
  0.601
emb2735
Embryo defective 2735 (162 aa)
           
  0.601
EMB2016
Embryo defective 2016 (2152 aa)
           
  0.601
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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