STRINGSTRING
AT1G04660 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G04660" - Glycine-rich protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G04660Glycine-rich protein (212 aa)    
Predicted Functional Partners:
AT2G29370
Tropine dehydrogenase (268 aa)
           
  0.878
AT4G19820
Glycosyl hydrolase family protein with chitinase insertion domain (366 aa)
           
  0.868
AT5G47480
RGPR-related; Required for efficient protein export from the endoplasmic reticulum (ER) to the Golgi by regulating COPII coat dynamics at the ER. Functions as a scaffold and regulator of COPII coat assembly at ER exit sites (1350 aa)
           
  0.867
AT4G19720
Glycosyl hydrolase family protein with chitinase insertion domain (363 aa)
           
  0.840
AT2G34700
Pollen Ole e 1 allergen and extensin family protein (175 aa)
     
   
  0.733
PAP85
Cupin family protein; Seed storage protein (486 aa)
           
  0.677
M17
Glycine-rich protein / late embryogenesis abundant protein (M17) (280 aa)
           
  0.592
RING1A
RING 1A (525 aa)
           
  0.554
ABI3
ABA INSENSITIVE 3; Participates in abscisic acid-regulated gene expression during seed development. Regulates the transcription of SGR1 and SGR2 that are involved in leaf and embryo degreening (720 aa)
     
   
  0.483
AGL15
AGAMOUS-like 15; Transcription factor involved in the negative regulation of flowering, probably through the photoperiodic pathway. Acts as both an activator and a repressor of transcription. Binds DNA in a sequence-specific manner in large CArG motif 5’-CC (A/T)8 GG-3’. Participates probably in the regulation of programs active during the early stages of embryo development. Prevents premature perianth senescence and abscission, fruits development and seed desiccation. Stimulates the expression of at least DTA4, LEC2, FUS3, ABI3, AT4G38680/CSP2 and GRP2B/CSP4. Can enhance somatic embry [...] (268 aa)
     
   
  0.476
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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