STRINGSTRING
AT1G04780 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G04780" - Ankyrin repeat family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G04780Ankyrin repeat family protein (664 aa)    
Predicted Functional Partners:
AT5G16680
RING/FYVE/PHD zinc finger-containing protein (1311 aa)
     
        0.446
AT1G02990
Uncharacterized protein (1278 aa)
     
        0.423
APG9
Autophagy 9; Required for autophagy that plays an essential role in plant nutrient recycling (PubMed-12114572). Contributes to efficient autophagic flux, especially in early autophagic process prior to the fusion of the autophagosome with the vacuole (PubMed-24805779) (866 aa)
     
        0.421
ABCD1
ATP-binding cassette D1; Contributes to the transport of fatty acids and their derivatives (acyl CoAs) across the peroxisomal membrane. Provides acetate to the glyoxylate cycle in developing seedlings. Involved in pollen tube elongation, ovule fertilization, and seeds germination after imbibition (controls the switch between the opposing developmental programs of dormancy and germination), probably by promoting beta-oxidation of storage lipids during gluconeogenesis. Required for biosynthesis of jasmonic acid and conversion of indole butyric acid to indole acetic acid. Confers sensitiv [...] (1352 aa)
     
        0.410
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (12%) [HD]