STRINGSTRING
AT1G04890 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G04890" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G04890Uncharacterized protein (411 aa)    
Predicted Functional Partners:
AT3G28820
Uncharacterized protein (434 aa)
     
        0.470
AT3G01250
Uncharacterized protein (164 aa)
     
        0.455
AT3G46750
Uncharacterized protein (388 aa)
     
        0.446
AT1G26320
2-alkenal reductase (351 aa)
     
        0.440
MAP65-9
Microtubule-associated protein 65-9 (549 aa)
     
        0.438
ACT4
Actin 4; Actins are highly conserved proteins that are involved in various types of cell motility and are ubiquitously expressed in all eukaryotic cells. Essential component of cell cytoskeleton; plays an important role in cytoplasmic streaming, cell shape determination, cell division, organelle movement and extension growth. This is considered as one of the reproductive actins (377 aa)
     
        0.438
AT5G58880
Uncharacterized protein (1088 aa)
     
        0.438
AT5G51030
NAD(P)-binding Rossmann-fold superfamily protein (314 aa)
     
        0.438
AT5G46770
Uncharacterized protein (133 aa)
     
        0.438
GNL2
GNOM-like 2; Activates the ARF proteins by exchanging bound GDP for free GTP. Plays a role in vesicular protein sorting. Essential for pollen germination (1375 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]