STRINGSTRING
AT1G05040 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G05040" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G05040Uncharacterized protein (166 aa)    
Predicted Functional Partners:
MSP2
Microspore-specific promoter 2 (192 aa)
     
        0.438
AT5G03620
Subtilisin-like serine endopeptidase family protein (766 aa)
     
        0.438
AT4G08670
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein (208 aa)
     
        0.438
LBD27
LOB domain-containing protein 27 (328 aa)
     
        0.438
GAD5
Glutamate decarboxylase 5; Catalyzes the production of GABA. The calmodulin-binding is calcium-dependent and it is proposed that this may, directly or indirectly, form a calcium regulated control of GABA biosynthesis (By similarity) (494 aa)
     
        0.438
PUM7
Pumilio 7; Sequence-specific RNA-binding protein that regulates translation and mRNA stability by binding the 3’-UTR of target mRNAs (650 aa)
     
        0.438
STP9
Sugar transporter 9; Mediates an active uptake of hexoses, probably by sugar/hydrogen symport. Mostly transports glucose, and barely galactose, xylose and mannose (517 aa)
     
        0.438
NIP4;1
Aquaporin NIP; Potential aquaporin, which may facilitate the transport of water and small neutral solutes across cell membranes (283 aa)
     
        0.437
AT5G13350
Auxin-responsive GH3 family protein (587 aa)
     
        0.437
AT5G07490
Uncharacterized protein (149 aa)
     
        0.437
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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