• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
KMS2 protein (Arabidopsis thaliana) - STRING interaction network
"KMS2" - Vacuole membrane protein KMS2 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMS2Vacuole membrane protein KMS2; Involved in the early secretory pathway. Required for the correct export of secretory products from the endoplasmic reticulum (ER) and involved in the maintenance of ER integrity (416 aa)    
Predicted Functional Partners:
SUN1
SUN domain-containing protein 1; Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments. Required for the maintenance and/or formation of polarized nuclear shape in root hairs. Modulates the anchoring and mobility of WIP proteins and RANGAP1 in the nuclear envelope (NE). In association with SUN2, may be involved in telomere attachment to nuclear envelope in the prophase of meiosis. As component of the SUN-WIP-WIT2-KAKU1 [...] (471 aa)
           
  0.837
WIP1
WPP domain interacting protein 1; Mediates and enhances the nuclear envelope docking of RANGAP proteins mediated by WIT1 and WIT2 in the undifferentiated cells of root tips. As component of the SUN-WIP-WIT2-KAKU1 complex, mediates the transfer of cytoplasmic forces to the nuclear envelope (NE), leading to nuclear shape changes (489 aa)
           
  0.837
SUN2
SUN domain-containing protein 2; Component of SUN-protein-containing multivariate complexes also called LINC complexes which link the nucleoskeleton and cytoskeleton by providing versatile outer nuclear membrane attachment sites for cytoskeletal filaments. Required for the maintenance and/or formation of polarized nuclear shape in root hairs. Modulates the anchoring and mobility of WIP proteins in the nuclear envelope (NE). In association with SUN2, may be involved in telomere attachment to nuclear envelope in the prophase of meiosis. As component of the SUN-WIP-WIT2-KAKU1 complex, med [...] (455 aa)
           
  0.769
AT3G03970
ARM repeat superfamily protein; Plays a role in innate immunity against the oomycete pathogen A.arabidopsidis (Hpa) (554 aa)
           
  0.740
AT1G54385
ARM repeat superfamily protein; Plays a role in nucleus positioning in guard cells (560 aa)
           
  0.739
APG9
Autophagy-related protein 9; Required for autophagy that plays an essential role in plant nutrient recycling. Contributes to efficient autophagic flux, especially in early autophagic process prior to the fusion of the autophagosome with the vacuole; Belongs to the ATG9 family (866 aa)
           
  0.714
AT3G47410
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G62400.1); Has 9 Blast hits to 9 proteins in 3 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (221 aa)
           
  0.710
ATG6
Beclin-1-like protein; Required for normal plant development. Required for pollen germination. Required for autophagic activity. Required to limit the pathogen-associated cell death response. May be involved in vacuolar protein sorting. Binds to microtubules. May facilitate efficient recruitment of other ATG proteins to assemble scaffolds for autophagosome biogenesis; Belongs to the beclin family (517 aa)
     
 
  0.699
AT4G24950
Unknown protein; Has 4 Blast hits to 4 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (157 aa)
           
  0.692
AT4G06676
Protein EI24 homolog; Contains the following InterPro domains- Etoposide-induced 2.4 (InterPro-IPR009890); Has 264 Blast hits to 262 proteins in 100 species- Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 16; Plants - 79; Viruses - 0; Other Eukaryotes - 39 (source- NCBI BLink); Belongs to the EI24 (TC 9.B.7) family (320 aa)
           
  0.679
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (9%) [HD]