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RTM1 protein (Arabidopsis thaliana) - STRING interaction network
"RTM1" - Mannose-binding lectin superfamily protein in Arabidopsis thaliana
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
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gene co-occurrence
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textmining
co-expression
protein homology
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RTM1Mannose-binding lectin superfamily protein; Required for the restriction of long-distance movement of the pathogenic tobacco etch virus (TEV) without causing a hypersensitive response or inducing systemic acquired resistance; Belongs to the jacalin lectin family (174 aa)    
Predicted Functional Partners:
RTM3
Encodes RTM3 (Restricted Tobacco etch potyvirus Movement), a protein belonging to a protein family of 29 members which has a meprin and TRAF homology (MATH) domain in its N-terminal region and a coiled-coil (CC) domain at its C-terminal end. There are at least three RTMs in Arabidopsis. RTM proteins might form a multiprotein complex in the resistance mechanism to block the long distance movement of potyviruses (301 aa)
     
 
  0.995
RTM2
HSP20-like chaperones superfamily protein; Specifically restricts the long-distance movement of tobacco etch potyvirus (TEV) without involving either hypersensitive cell death or systemic acquired resistance. Multidomain protein containing an N-terminal region with high similarity to plant small heat shock proteins (HSPs) (366 aa)
     
   
  0.974
JAX1
Mannose-binding lectin superfamily protein; Contains the following InterPro domains- Mannose-binding lectin (InterPro-IPR001229); BEST Arabidopsis thaliana protein match is- Mannose-binding lectin superfamily protein (TAIR-AT1G60110.1); Has 733 Blast hits to 335 proteins in 12 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 733; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (120 aa)
           
  0.904
AT2G27140
HSP20-like chaperones superfamily protein; Its function is described as molecular_function unknown; Involved in response to heat; Located in membrane; Expressed in 19 plant structures; Expressed during 12 growth stages; Contains the following InterPro domains- Heat shock protein Hsp20 (InterPro-IPR002068), HSP20-like chaperone (InterPro-IPR008978); BEST Arabidopsis thaliana protein match is- HSP20-like chaperones superfamily protein (TAIR-AT5G20970.1); Has 712 Blast hits to 708 proteins in 96 species- Archae - 0; Bacteria - 37; Metazoa - 7; Fungi - 2; Plants - 649; Viruses - 0; Other E [...] (224 aa)
     
   
  0.871
AT3G10680
HSP20-like chaperones superfamily protein; Contains the following InterPro domains- Heat shock protein Hsp20 (InterPro-IPR002068), HSP20-like chaperone (InterPro-IPR008978); BEST Arabidopsis thaliana protein match is- HSP20-like chaperones superfamily protein (TAIR-AT5G04890.1); Has 10151 Blast hits to 7022 proteins in 776 species- Archae - 41; Bacteria - 1142; Metazoa - 3661; Fungi - 700; Plants - 785; Viruses - 49; Other Eukaryotes - 3773 (source- NCBI BLink) (490 aa)
     
   
  0.840
AT3G58360
MATH domain and coiled-coil domain-containing protein At3g58360; TRAF-like family protein; Contains the following InterPro domains- TRAF-like (InterPro-IPR008974), MATH (InterPro-IPR002083); BEST Arabidopsis thaliana protein match is- RESTRICTED TEV MOVEMENT 3 (TAIR-AT3G58350.1); Has 957 Blast hits to 809 proteins in 101 species- Archae - 2; Bacteria - 0; Metazoa - 16; Fungi - 96; Plants - 806; Viruses - 0; Other Eukaryotes - 37 (source- NCBI BLink) (298 aa)
           
  0.794
AT2G28140
Protein of unknown function (DUF1635); Contains the following InterPro domains- Protein of unknown function DUF1635 (InterPro-IPR012862); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF1635) (TAIR-AT5G22930.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (211 aa)
           
  0.643
NAC005
NAC domain containing protein 5 (NAC005); Its function is described as sequence-specific DNA binding transcription factor activity; Involved in multicellular organismal development, regulation of transcription; Located in cellular_component unknown; Expressed in xylem; Contains the following InterPro domains- No apical meristem (NAM) protein (InterPro-IPR003441); BEST Arabidopsis thaliana protein match is- NAC domain containing protein 4 (TAIR-AT1G02230.1); Has 2682 Blast hits to 2674 proteins in 69 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2682; Viruses - 0; [...] (362 aa)
           
  0.624
SEOa
Protein SIEVE ELEMENT OCCLUSION A; Scaffold protein required to form the phloem filament matrix in sieve elements (822 aa)
     
   
  0.594
MEE13
Myosin heavy chain-like protein; Maternal effect embryo arrest 13 (MEE13); Its function is described as molecular_function unknown; Involved in embryo development ending in seed dormancy; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 15 growth stages; Has 12137 Blast hits to 7799 proteins in 703 species- Archae - 154; Bacteria - 800; Metazoa - 7483; Fungi - 815; Plants - 597; Viruses - 3; Other Eukaryotes - 2285 (source- NCBI BLink) (652 aa)
           
  0.580
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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