STRINGSTRING
AT1G05770 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G05770" - Mannose-binding lectin-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G05770Mannose-binding lectin-like protein (184 aa)    
Predicted Functional Partners:
AT2G27140
Heat shock family protein (224 aa)
     
   
  0.962
AT3G58360
TRAF-like family protein (298 aa)
           
  0.879
MMZ3
MMS ZWEI homologue 3; Has no ubiquitin ligase activity on its own. The heterodimer with UBC catalyzes the synthesis of non-canonical poly-ubiquitin chains that are linked through ’Lys-63’. This type of poly-ubiquitination does not lead to protein degradation by the proteasome. Mediates transcriptional activation of target genes. May play a role in the control of progress through the cell cycle and differentiation. May play a role in the error-free DNA repair pathway and contributes to the survival of cells after DNA damage (146 aa)
           
  0.709
RTM3
RESTRICTED TEV MOVEMENT 3; Required for the restriction of long-distance movement of the pathogenic tobacco etch virus (TEV) without causing a hypersensitive response or inducing systemic acquired resistance (301 aa)
     
   
  0.703
AT3G47940
DNAJ heat shock family protein (350 aa)
           
  0.670
AT3G10680
Heat shock-related protein (490 aa)
           
  0.670
RTM2
HSP20-like chaperone; Required for the restriction of long-distance movement of the pathogenic tobacco etch virus (TEV) without causing a hypersensitive response or inducing systemic acquired resistance. Seems to not be involved in heat resistance (366 aa)
           
  0.606
ZAC
ADP-ribosylation factor GTPase-activating protein AGD12; GTPase-activating protein (GAP) for ADP ribosylation factor (ARF). Binds phosphatidylinositol 3-monophosohate (PI-3-P) and anionic phospholipids (337 aa)
           
  0.600
AT1G62660
Beta-fructofuranosidase; Possible role in the continued mobilization of sucrose to sink organs (648 aa)
           
  0.600
BRX
BREVIS RADIX; Acts as a regulator of cell proliferation and elongation in the root and shoot. Probable transcription regulator. Regulated by the auxin response factor ARF5. Polarly localized in vascular cells and subject to endocytic recycling. Required for CPD expression and for correct nuclear auxin response. Mediates cross- talk between the auxin and brassinosteroid pathways. BRX is a target for auxin-induced, proteasome-mediated degradation (344 aa)
           
  0.442
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (8%) [HD]