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AT1G05835 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G05835" - PHD finger protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G05835PHD finger protein (127 aa)    
Predicted Functional Partners:
TRO
TRAUCO; Trithorax-group gene homolog required for early embryogenesis (PubMed-20118203, PubMed-21423667). Required for the expression of FLC and FLC homologs and represses flowering (PubMed-21423667). Required for proper leaf growth and development (PubMed-21423667). Part of COMPASS-like complexes responsible for H3K4 trimethylation, but not for di- or mono-methylation of histone H3 ’Lys-4’ (PubMed-21423667). Binds to target loci chromatin, increasing H3K4 trimethylation and causing activation of the gene (PubMed-21423667) (509 aa)
       
 
  0.955
AT3G21060
RbBP5 LIKE; Promotes the expression of FLC and FLC homologs to repress the floral transition (547 aa)
     
 
  0.955
AT5G66240
transducin/WD40 domain-containing protein (331 aa)
       
 
  0.922
AT5G14530
transducin/WD40 domain-containing protein (330 aa)
       
 
  0.922
AL4
Alfin-like 4; Histone-binding component that specifically recognizes H3 tails trimethylated on ’Lys-4’ (H3K4me3), which mark transcription start sites of virtually all active genes (255 aa)
     
 
  0.818
AL5
Alfin-like 5; Histone-binding component that specifically recognizes H3 tails trimethylated on ’Lys-4’ (H3K4me3), which mark transcription start sites of virtually all active genes (260 aa)
     
 
  0.818
AL1
Alfin-like 1; Histone-binding component that specifically recognizes H3 tails trimethylated on ’Lys-4’ (H3K4me3), which mark transcription start sites of virtually all active genes (241 aa)
     
 
  0.818
SHL1
Short life; Chromatin remodeling factor that binds to methylated histone (e.g. H3K4me2/3) to prevent their acetylation (e.g. H3K9K14Ac), likely by recruiting histone deacetylase (HDAC) complexes, and thus regulate the transcription of target genes (PubMed-25281686). Required during development and for fertility, probably by modulating developmental gene expression (PubMed-11129039, PubMed-15082927, PubMed-25281686). Promotes development speed, but at fitness cost (PubMed-11129039). Involved in the chromatin-mediated repression of floral initiation and controls genes regulating flowerin [...] (228 aa)
     
 
  0.818
EBS
EARLY BOLTING IN SHORT DAYS; Chromatin remodeling factor that binds to methylated histone (e.g. H3K4me2/3) to prevent their acetylation (e.g. H3K9K14Ac), likely by recruiting histone deacetylase (HDAC) complexes, and thus regulate the transcription of target genes (PubMed-25281686). Negative regulator in developmental processes in a gibberellic acid- (GA-) dependent manner, such as germination, flowering induction, and flower organ specification, probably by modulating developmental gene expression (PubMed-11340178, PubMed-25281686). Involved in the chromatin- mediated repression of fl [...] (234 aa)
     
 
  0.818
AT4G04260
Bromo-adjacent homology (BAH) domain-containing protein; Chromatin remodeling factor that binds to methylated histone (e.g. H3K4me2/3) to prevent their acetylation (e.g. H3K9K14Ac), likely by recruiting histone deacetylase (HDAC) complexes, and thus regulate the transcription of target genes (193 aa)
     
 
  0.818
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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