STRINGSTRING
AT1G05920 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G05920" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G05920Uncharacterized protein (315 aa)    
Predicted Functional Partners:
AT5G22170
Uncharacterized protein (179 aa)
     
        0.438
AT4G23580
F-box/kelch-repeat protein (383 aa)
     
        0.438
AT4G11750
Putative F-box/kelch-repeat protein (386 aa)
     
        0.438
AT2G29800
Putative F-box/kelch-repeat protein (414 aa)
     
        0.438
CYCT1;1
Cyclin T1-1 (247 aa)
     
        0.438
AT5G15060
LOB domain-containing protein 34 (141 aa)
     
        0.437
AT3G59240
RNI-like superfamily protein (504 aa)
     
        0.437
AT3G45460
IBR domain containing protein (389 aa)
     
        0.437
AT3G19070
Cell wall protein-like protein (346 aa)
     
        0.437
AT1G24200
Paired amphipathic helix repeat-containing protein (196 aa)
     
        0.437
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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