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STRINGSTRING
AT1G06200 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G06200" - Peptidase S24/S26A/S26B/S26C family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G06200Peptidase S24/S26A/S26B/S26C family protein; Contains the following InterPro domains- Peptidase S24/S26A/S26B/S26C, beta-ribbon domain (InterPro-IPR011056), Peptidase S24/S26A/S26B/S26C (InterPro-IPR015927); BEST Arabidopsis thaliana protein match is- Peptidase S24/S26A/S26B/S26C family protein (TAIR-AT2G31140.1); Has 259 Blast hits to 259 proteins in 81 species- Archae - 0; Bacteria - 8; Metazoa - 68; Fungi - 34; Plants - 130; Viruses - 0; Other Eukaryotes - 19 (source- NCBI BLink) (206 aa)    
Predicted Functional Partners:
AT5G27430
Signal peptidase complex subunit 3B; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum (167 aa)
     
 
  0.719
AT3G05230
Signal peptidase complex subunit 3A; Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum; Belongs to the SPCS3 family (167 aa)
     
 
  0.719
AT3G26410
Methyltransferases;nucleic acid binding; Its function is described as methyltransferase activity, nucleic acid binding; Involved in methylation; Located in endomembrane system; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Putative RNA methylase (InterPro-IPR000241), tRNA guanosine-2'-O-methyltransferase, TRM11 (InterPro-IPR016691), DNA methylase, N-6 adenine-specific, conserved site (InterPro-IPR002052); Has 597 Blast hits to 588 proteins in 280 species- Archae - 150; Bacteria - 5; Metazoa - 158; Fungi - 132; Plants [...] (477 aa)
         
  0.580
AT5G49400
Zinc knuckle (CCHC-type) family protein; Its function is described as zinc ion binding, nucleic acid binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Zinc finger, CCHC-type (InterPro-IPR001878); Has 46316 Blast hits to 20637 proteins in 1119 species- Archae - 19; Bacteria - 12274; Metazoa - 18717; Fungi - 3822; Plants - 2024; Viruses - 338; Other Eukaryotes - 9122 (source- NCBI BLink) (275 aa)
           
  0.526
AT4G40042
Microsomal signal peptidase 12 kDa subunit (SPC12); Its function is described as peptidase activity; Involved in signal peptide processing; Located in endomembrane system, integral to membrane, signal peptidase complex; Contains the following InterPro domains- Microsomal signal peptidase 12kDa subunit (InterPro-IPR009542); BEST Arabidopsis thaliana protein match is- Microsomal signal peptidase 12 kDa subunit (SPC12) (TAIR-AT2G22425.2); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eu [...] (93 aa)
     
 
  0.500
AT2G22425
Microsomal signal peptidase 12 kDa subunit (SPC12); Microsomal signal peptidase is a membrane-bound endoproteinase that removes signal peptides from nascent proteins as they are translocated into the lumen of the endoplasmic reticulum (92 aa)
     
 
  0.500
AT4G30600
Signal recognition particle receptor alpha subunit family protein; Its function is described as nucleoside-triphosphatase activity, signal recognition particle binding, GTP binding, GTPase activity, nucleotide binding; Involved in intracellular protein transport, protein targeting, SRP-dependent cotranslational protein targeting to membrane; Located in endoplasmic reticulum, signal recognition particle, endoplasmic reticulum targeting; Expressed in 25 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- ATPase, AAA+ type, core (InterPro-IPR00359 [...] (634 aa)
   
   
  0.466
AT3G11880
Protein of unknown function DUF2359, transmembrane; Contains the following InterPro domains- Protein of unknown function DUF2359, transmembrane (InterPro-IPR019308); BEST Arabidopsis thaliana protein match is- Protein of unknown function DUF2359, transmembrane (TAIR-AT1G70770.2); Has 155 Blast hits to 134 proteins in 26 species- Archae - 0; Bacteria - 0; Metazoa - 47; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (443 aa)
           
  0.465
AT1G70770
Protein of unknown function DUF2359, transmembrane; Its function is described as molecular_function unknown; Located in endoplasmic reticulum, nucleus; Expressed in 25 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Protein of unknown function DUF2359, transmembrane (InterPro-IPR019308); BEST Arabidopsis thaliana protein match is- Protein of unknown function DUF2359, transmembrane (TAIR-AT1G23170.2) (610 aa)
           
  0.465
AT1G23170
Protein of unknown function DUF2359, transmembrane; Its function is described as molecular_function unknown; Involved in biological_process unknown; Contains the following InterPro domains- Protein of unknown function DUF2359, transmembrane (InterPro-IPR019308); BEST Arabidopsis thaliana protein match is- Protein of unknown function DUF2359, transmembrane (TAIR-AT1G70770.2) (615 aa)
           
  0.465
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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