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STRINGSTRING
GTE4 protein (Arabidopsis thaliana) - STRING interaction network
"GTE4" - Global transcription factor group E4 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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GTE4Global transcription factor group E4; Involved in the activation and maintenance of cell division in the meristems and by this controls cell numbers in differentiated organs. Its action in cell cycle regulation may be directed through the RB-E2F pathway (766 aa)    
Predicted Functional Partners:
AT5G59140
BTB/POZ domain-containing protein; Involved in ubiquitin-dependent protein catabolic process; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- BTB/POZ fold (InterPro-IPR011333), SKP1 component, POZ (InterPro-IPR016073); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (96 aa)
       
 
  0.776
NERD
Nucleic acid binding;zinc ion binding;DNA binding; Plays a central role in integrating RNA silencing and chromatin signals in 21 nt siRNA-dependent DNA methylation on cytosine pathway leading to transcriptional gene silencing of specific sequences. Involved in a chromatin-based RNA silencing pathway that encompasses both post-transcriptional gene silencing (PTGS) (e.g. RDR1, RDR6 and AGO2) and transcriptional gene silencing (TGS) (e.g. siRNA-dependent DNA methylation and histone H3) components. Mediates siRNA accumulation at specific chromatin loci. Binds H3K4me0 through its PHD to enf [...] (1773 aa)
     
 
  0.771
AT3G51120
DNA binding;zinc ion binding;nucleic acid binding;nucleic acid binding; Its function is described as DNA binding, zinc ion binding, nucleic acid binding; Involved in histone modification, transcription initiation; Located in nucleus; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Zinc finger, CCCH-type (InterPro-IPR000571), Plus-3 domain, subgroup (InterPro-IPR018144), Zinc finger, PHD-type, conserved site (InterPro-IPR019786), Zinc finger, PHD-type (InterPro-IPR001965), GYF (InterPro-IPR003169), SWIB/MDM2 domain (InterPro- [...] (1292 aa)
     
 
  0.749
AT2G18090
Uncharacterized protein At2g18090; PHD finger family protein / SWIB complex BAF60b domain-containing protein / GYF domain-containing protein; Its function is described as DNA binding, zinc ion binding; Involved in regulation of transcription, DNA-dependent; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Zinc finger, PHD-type, conserved site (InterPro-IPR019786), SWIB/MDM2 domain (InterPro-IPR003121), Zinc finger, PHD-type (InterPro-IPR001965), Zinc finger, FYVE/PHD-type (InterPro-IPR011011), GYF (InterPro-IPR003169), Zinc f [...] (824 aa)
     
 
  0.742
BRD4
Bromodomain protein with a DNA binding motif (475 aa)
           
  0.739
AT2G47210
Myb-like transcription factor family protein; Component of the SWR1 complex which mediates the ATP- dependent exchange of histone H2A for the H2A variant HZT1 leading to transcriptional regulation of selected genes by chromatin remodeling. Component of the NuA4 histone acetyltransferase complex which is involved in transcriptional activation of selected genes principally by acetylation of nucleosomal histone H4 and H2A (441 aa)
     
 
  0.731
AT1G77030
Putative DEAD-box ATP-dependent RNA helicase 29; Hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases; Its function is described as in 6 functions; Involved in biological_process unknown; Located in nucleus; Contains the following InterPro domains- RNA helicase, DEAD-box type, Q motif (InterPro-IPR014014), DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro-IPR011545), DBP10CT (InterPro-IPR012541), DEAD-like helicase, N-terminal (InterPro-IPR014001), DNA/RNA helicase, C-terminal [...] (845 aa)
     
 
  0.727
AT5G57860
Ubiquitin-like superfamily protein; Contains the following InterPro domains- Ubiquitin (InterPro-IPR000626), Ubiquitin supergroup (InterPro-IPR019955); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (95 aa)
       
      0.722
AT5G63700
Zinc ion binding;DNA binding; Its function is described as DNA binding, zinc ion binding; Involved in histone modification, transcription initiation; Located in nucleus; Expressed in 18 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Zinc finger, RING-type, conserved site (InterPro-IPR017907), Plus-3 domain, subgroup (InterPro-IPR018144), SWIB/MDM2 domain (InterPro-IPR003121), Zinc finger, PHD-type (InterPro-IPR001965), Plus-3 (InterPro-IPR004343), Zinc finger, FYVE/PHD-type (InterPro-IPR011011); BEST Arabidopsis thaliana protein match is- [...] (602 aa)
     
 
  0.689
HAF01
Transcription initiation factor TFIID subunit 1; This gene is predicted to encode a histone acetyltransferase. Five lines with RNAi constructs directed against HAF1 grow normally and can produce root calli, but have defects in agrobacterium-mediated transformation; Belongs to the TAF1 family (1919 aa)
     
 
  0.672
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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