STRINGSTRING
AT1G06240 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G06240" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G06240Uncharacterized protein (383 aa)    
Predicted Functional Partners:
PRXQ
Peroxiredoxin Q; Reduces hydrogen peroxide with reducing equivalents provided through the thioredoxin system. Could be involved in the photosystem II protection against hydrogen peroxide (217 aa)
              0.454
AT1G66910
Protein kinase superfamily protein (666 aa)
     
        0.434
AT5G52030
TraB family protein (402 aa)
     
        0.432
AT1G10330
Pentatricopeptide repeat-containing protein (467 aa)
     
        0.430
AT2G40815
Calcium-dependent lipid-binding (CaLB domain) family protein (367 aa)
     
        0.407
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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