STRINGSTRING
AT1G06270 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G06270" - Pentatricopeptide repeat-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G06270Pentatricopeptide repeat-containing protein (343 aa)    
Predicted Functional Partners:
AT2G37310
Pentatricopeptide repeat-containing protein (657 aa)
     
   
  0.605
AT4G02820
Pentatricopeptide repeat-containing protein (532 aa)
     
   
  0.553
AT5G64950
Mitochondrial transcription termination factor family protein (391 aa)
     
 
  0.552
AT5G54910
DEAD-box ATP-dependent RNA helicase 32 (739 aa)
     
   
  0.541
AT4G19650
Mitochondrial transcription termination factor family protein (575 aa)
     
 
  0.539
AT1G61990
Mitochondrial transcription termination factor family protein (414 aa)
     
 
  0.535
AT4G02750
Pentatricopeptide repeat-containing protein (781 aa)
     
   
  0.531
AT1G62010
Mitochondrial transcription termination factor family protein (415 aa)
     
 
  0.531
AT1G62150
Mitochondrial transcription termination factor family protein (463 aa)
     
 
  0.529
AT3G02490
Pentatricopeptide repeat-containing protein (665 aa)
     
   
  0.527
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]