STRINGSTRING
AT1G06560 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G06560" - NOL1/NOP2/sun-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G06560NOL1/NOP2/sun-like protein (599 aa)    
Predicted Functional Partners:
AT5G04600
RNA recognition motif-containing protein (222 aa)
     
 
  0.999
AT5G14520
Pescadillo-related protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (590 aa)
     
 
  0.998
AT1G25260
Ribosomal protein L10 family protein (235 aa)
     
 
  0.998
AT5G15550
transducin/WD40 domain-containing protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (433 aa)
     
 
  0.998
AT2G21440
RNA recognition motif-containing protein (1003 aa)
     
 
  0.998
AT3G16840
DEAD-box ATP-dependent RNA helicase 13 (826 aa)
     
 
  0.998
AT1G77030
DEAD-box helicase domain-containing protein (845 aa)
     
 
  0.997
AT2G40360
transducin/WD-40 repeat-containing protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (753 aa)
     
 
  0.997
AT4G15770
RNA binding; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (187 aa)
   
 
  0.997
AT1G50920
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (671 aa)
     
 
  0.997
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (11%) [HD]