STRINGSTRING
AT1G06930 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G06930" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G06930Uncharacterized protein (169 aa)    
Predicted Functional Partners:
AT5G50175
Uncharacterized protein (112 aa)
     
        0.438
AT3G21680
Uncharacterized protein (119 aa)
     
        0.438
AT1G17860
Kunitz family trypsin and protease inhibitor protein (196 aa)
     
        0.438
AT5G23830
MD-2-related lipid recognition domain-containing protein (164 aa)
     
        0.437
AT4G33590
Uncharacterized protein (466 aa)
     
        0.437
AT3G13435
Uncharacterized protein (71 aa)
     
        0.437
YUC3
YUCCA 3; Involved in auxin biosynthesis. Belongs to the set of redundant YUCCA genes probably responsible for auxin biosynthesis in roots (437 aa)
     
        0.436
AT3G22570
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein (116 aa)
     
        0.435
AT2G21045
Rhodanese-like domain-containing protein (169 aa)
     
        0.435
CLE14
CLAVATA3/ESR-RELATED 14; Extracellular signal peptide that regulates cell fate. Represses root apical meristem maintenance (80 aa)
     
        0.435
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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