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AT1G06990 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G06990" - GDSL esterase/lipase in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G06990GDSL esterase/lipase (360 aa)    
Predicted Functional Partners:
At1g75930
Extracellular lipase 6; Required for the formation of pollen coats and male fertility (343 aa)
   
     
0.465
AT1G75920
GDSL esterase/lipase EXL5 (353 aa)
     
     
0.465
AT5G07600
Oleosin family protein (230 aa)
     
        0.463
AT1G26710
Uncharacterized protein (168 aa)
     
        0.463
KCS7
3-ketoacyl-CoA synthase 7 (460 aa)
     
        0.452
AT1G20150
Subtilisin-like serine endopeptidase-like protein (780 aa)
     
   
  0.451
LTP12
Lipid transfer protein 12; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues (By similarity) (119 aa)
     
        0.448
AT3G07450
Protease inhibitor/seed storage/lipid transfer protein (LTP) family protein (106 aa)
     
   
  0.448
AT1G23670
Uncharacterized protein (264 aa)
     
        0.447
CYP86C4
Member of CYP86C (529 aa)
     
        0.447
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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