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AT1G07040 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G07040" - Uncharacterized protein At1g07040 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G07040Uncharacterized protein At1g07040; Unknown protein; Involved in biological_process unknown; Located in chloroplast; Expressed in 24 plant structures; Expressed during 14 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G27030.1); Has 540 Blast hits to 538 proteins in 187 species- Archae - 0; Bacteria - 333; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 140 (source- NCBI BLink) (371 aa)    
Predicted Functional Partners:
HGO
Homogentisate 1,2-dioxygenase (461 aa)
     
        0.799
IVD
Isovaleryl-CoA dehydrogenase, mitochondrial; Encodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate; Belongs to the acyl-CoA dehydrogenase family (409 aa)
     
        0.770
AT5G35460
At5g35460/MOK9_4; Unknown protein; Contains the following InterPro domains- Protein of unknown function DUF2838 (InterPro-IPR021261); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (381 aa)
           
  0.663
AT4G13400
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; BEST Arabidopsis thaliana protein match is- 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR-AT3G63290.1); Has 390 Blast hits to 389 proteins in 142 species- Archae - 0; Bacteria - 106; Metazoa - 14; Fungi - 122; Plants - 74; Viruses - 0; Other Eukaryotes - 74 (source- NCBI BLink) (357 aa)
           
  0.663
ALDH7B4
Aldehyde dehydrogenase family 7 member B4; Aldehyde dehydrogenase (508 aa)
     
        0.650
emb2410
Embryo defective 2410 (emb2410); Its function is described as molecular_function unknown; Involved in embryo development ending in seed dormancy; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein of unknown function DUF490 (InterPro-IPR007452); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (2166 aa)
           
  0.587
BCAT-2
Branched-chain-amino-acid aminotransferase 2, chloroplastic; Converts 2-oxo acids to branched-chain amino acids. Shows activity with L-Leu, L-Ile and L-Val as amino donors and 2- oxoglutarate as an amino acceptor, but no activity for D-isomers of Leu, Ile, Val, Asp, Glu or Ala; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family (388 aa)
     
        0.481
AT1G21400
Thiamin diphosphate-binding fold (THDP-binding) superfamily protein; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components- branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3) (By similarity). Required during sugar starvation (472 aa)
     
        0.449
MCCA
Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; Biotin-attachment subunit of the 3-methylcrotonyl-CoA carboxylase, an enzyme that catalyzes the conversion of 3- methylcrotonyl-CoA to 3-methylglutaconyl-CoA, a critical step for leucine and isovaleric acid catabolism (734 aa)
     
        0.425
AT4G33150
Lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzyme; Bifunctional enzyme that catalyzes the first two steps in lysine degradation. The N-terminal and the C-terminal contain lysine-oxoglutarate reductase and saccharopine dehydrogenase activity, respectively. Negatively regulates free Lys accumulation in seeds; In the N-terminal section; belongs to the AlaDH/PNT family (1064 aa)
     
        0.422
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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