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AT1G07050 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G07050" - CCT motif family protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G07050CCT motif family protein (195 aa)    
Predicted Functional Partners:
BBX8
B-box domain protein 8 (373 aa)
     
   
  0.833
COL9
CONSTANS-like 9 (372 aa)
     
   
  0.802
PRR3
Pseudo-response regulator 3 (522 aa)
     
     
0.796
ELF4
EARLY FLOWERING 4; Component of the central CCA1/LHY-TOC1 feedback loop in the circadian clock that promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles. Part of a corepressor complex consisting of ELF4, ELF3, and LUX involved in the transcriptional regulation of APRR9. Increases ELF3 nuclear distribution and localization in nuclear bodies. Required for responsiveness to continuous red, by regulating phytochrome B (phyB) signaling (including during seedling de- etiolation) and gene expression. Mediates both entrainment to an environmen [...] (111 aa)
     
   
  0.795
AT4G33980
Uncharacterized protein (232 aa)
     
        0.791
AT5G23240
DNAJ heat shock N-terminal domain-containing protein (465 aa)
     
        0.789
COR27
Cold regulated gene 27 (246 aa)
     
        0.787
AT1G17665
Uncharacterized protein (338 aa)
     
        0.745
TOC1
TIMING OF CAB EXPRESSION 1; Controls photoperiodic flowering response. Component of the circadian clock. Expression of several members of the ARR-like family is controlled by circadian rhythm. The particular coordinated sequential expression of APRR9, APRR7, APRR5, APRR3 and APPR1 result to circadian waves that may be at the basis of the endogenous circadian clock. Positive regulator of CCA1 and LHY expression (618 aa)
     
   
0.681
AT2G29290
Tropine dehydrogenase (262 aa)
       
 
  0.674
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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