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AT1G07210 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G07210" - Uncharacterized protein At1g07210 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G07210Uncharacterized protein At1g07210; Ribosomal protein S18; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, intracellular; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Ribosomal protein S18 (InterPro-IPR001648); Has 5527 Blast hits to 5527 proteins in 2078 species- Archae - 0; Bacteria - 4261; Metazoa - 44; Fungi - 19; Plants - 203; Viruses - 0; Other Eukaryotes - 1000 (source- NCBI BLink) (261 aa)    
Predicted Functional Partners:
AT1G07830
Ribosomal protein L29 family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in mitochondrion, ribosome, mitochondrial ribosome, intracellular; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L47, mitochondrial (InterPro-IPR010729), Ribosomal protein L29 (InterPro-IPR001854); Has 365 Blast hits to 365 proteins in 201 species- Archae - 0; Bacteria - 2; Metazoa - 115; Fungi - 146; Plants - 47; Viruses - 0; Other Eukaryotes - 55 (source- NCBI BLink) (144 aa)
     
 
  0.995
AT4G39880
Ribosomal protein L23/L15e family protein; Its function is described as structural constituent of ribosome, nucleotide binding; Involved in translation, ribosome biogenesis; Located in ribosome, intracellular; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L23/L15e, core (InterPro-IPR012678), Nucleotide-binding, alpha-beta plait (InterPro-IPR012677), Ribosomal protein L25/L23 (InterPro-IPR013025); Has 3109 Blast hits to 3109 proteins in 1190 species- Archae - 0; Bacteria - 2436; Metazoa - 5; Fungi - 1; Pla [...] (178 aa)
     
 
  0.989
AT4G01310
50S ribosomal protein L5, chloroplastic; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit (262 aa)
     
 
  0.989
AT2G20060
Ribosomal protein L4/L1 family; Its function is described as structural constituent of ribosome, rRNA binding; Involved in translation; Located in ribosome, intracellular, chloroplast, large ribosomal subunit; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L4 (InterPro-IPR015498), Ribosomal protein L4/L1e, bacterial-type (InterPro-IPR013005), Ribosomal protein L4/L1e (InterPro-IPR002136); BEST Arabidopsis thaliana protein match is- ribosomal protein L4 (TAIR-AT1G07320.4); Has 8236 Blast hits to 8236 protei [...] (300 aa)
     
 
  0.988
RPL4
50S ribosomal protein L4, chloroplastic; This protein binds directly and specifically to 23S rRNA (By similarity). May play a role in plastid transcriptional regulation; Belongs to the universal ribosomal protein uL4 family (282 aa)
     
 
  0.986
AT3G59650
Mitochondrial ribosomal protein L51/S25/CI-B8 family protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in mitochondrion; Expressed in 21 plant structures; Expressed during 12 growth stages; Contains the following InterPro domains- Ribosomal protein/NADH dehydrogenase domain (InterPro-IPR007741) (146 aa)
     
      0.985
AT5G09770
Ribosomal protein L17 family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, intracellular; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L17 (InterPro-IPR000456); BEST Arabidopsis thaliana protein match is- Ribosomal protein L17 family protein (TAIR-AT5G64650.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (sour [...] (160 aa)
     
 
  0.983
AT5G15220
Ribosomal protein L27 family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, intracellular; Contains the following InterPro domains- Ribosomal protein L27 (InterPro-IPR001684), Ribosomal protein L27, conserved site (InterPro-IPR018261); BEST Arabidopsis thaliana protein match is- Ribosomal protein L27 family protein (TAIR-AT2G16930.3); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (154 aa)
     
 
  0.983
AT1G16870
Mitochondrial 28S ribosomal protein S29-related; Contains the following InterPro domains- Ribosomal protein S23/S29, mitochondrial (InterPro-IPR019368); Has 239 Blast hits to 239 proteins in 116 species- Archae - 0; Bacteria - 0; Metazoa - 106; Fungi - 38; Plants - 38; Viruses - 0; Other Eukaryotes - 57 (source- NCBI BLink) (480 aa)
     
 
  0.983
AT5G64650
Ribosomal protein L17 family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, intracellular; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L17 (InterPro-IPR000456); BEST Arabidopsis thaliana protein match is- Ribosomal protein L17 family protein (TAIR-AT5G09770.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (sour [...] (160 aa)
     
 
  0.983
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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