STRINGSTRING
RTFL3 protein (Arabidopsis thaliana) - STRING interaction network
"RTFL3" - ROTUNDIFOLIA like 3 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RTFL3ROTUNDIFOLIA like 3 (107 aa)    
Predicted Functional Partners:
AT5G67490
Uncharacterized protein (108 aa)
           
  0.676
AT5G65320
Transcription factor bHLH99 (296 aa)
           
  0.676
AT5G03460
Uncharacterized protein (89 aa)
           
  0.676
AT3G49930
C2H2 and C2HC zinc finger-containing protein (215 aa)
           
  0.676
RTFL16
ROTUNDIFOLIA like 16 (40 aa)
           
  0.676
RALFL24
Ralf-like 24; Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity) (118 aa)
           
  0.676
AT3G13845
Uncharacterized protein (70 aa)
           
  0.676
AT1G67865
Uncharacterized protein (75 aa)
           
  0.676
AT1G67860
Uncharacterized protein (78 aa)
           
  0.676
AT1G65490
Uncharacterized protein (88 aa)
           
  0.676
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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