• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G07690 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G07690" - Transmembrane protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G07690Transmembrane protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in root; Contains the following InterPro domains- Orthoreovirus membrane fusion p10 (InterPro-IPR009854); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G54950.1); Has 11 Blast hits to 11 proteins in 4 species- Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 7; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (179 aa)    
Predicted Functional Partners:
AT3G57250
Emsy N Terminus (ENT) domain-containing protein; Contains the following InterPro domains- ENT (InterPro-IPR005491); Has 6 Blast hits to 6 proteins in 3 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source- NCBI BLink) (142 aa)
           
  0.903
AT1G61090
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G61095.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (118 aa)
           
  0.903
AT1G12180
14.7 kDa heat shock-like protein; BEST Arabidopsis thaliana protein match is- HSP20-like chaperones superfamily protein (TAIR-AT5G47600.1); Has 8 Blast hits to 8 proteins in 3 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (119 aa)
           
  0.899
AT5G46300
Unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (208 aa)
           
  0.861
AT1G52460
alpha/beta-Hydrolases superfamily protein; Its function is described as hydrolase activity; Involved in biological_process unknown; Located in cellular_component unknown; Contains the following InterPro domains- Phospholipase/carboxylesterase (InterPro-IPR003140); BEST Arabidopsis thaliana protein match is- alpha/beta-Hydrolases superfamily protein (TAIR-AT1G52440.1); Has 158 Blast hits to 158 proteins in 36 species- Archae - 0; Bacteria - 5; Metazoa - 45; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (230 aa)
           
  0.861
AT1G51000
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G51020.1); Has 19 Blast hits to 16 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (72 aa)
           
  0.861
AT4G29570
Cytidine/deoxycytidylate deaminase family protein; This enzyme scavenges exogenous and endogenous cytidine and 2’-deoxycytidine for UMP synthesis (293 aa)
           
  0.699
AT3G11380
Pentatricopeptide repeat (PPR) superfamily protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in mitochondrion; Contains the following InterPro domains- Pentatricopeptide repeat (InterPro-IPR002885); BEST Arabidopsis thaliana protein match is- Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR-AT1G28020.1); Has 4044 Blast hits to 2539 proteins in 107 species- Archae - 0; Bacteria - 6; Metazoa - 8; Fungi - 2; Plants - 3964; Viruses - 0; Other Eukaryotes - 64 (source- NCBI BLink) (541 aa)
           
  0.641
AT2G31290
Ubiquitin carboxyl-terminal hydrolase family protein; Located in mitochondrion; Expressed in 17 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- RNA recognition domain, plant (InterPro-IPR021099); BEST Arabidopsis thaliana protein match is- Ubiquitin carboxyl-terminal hydrolase family protein (TAIR-AT3G63090.1); Has 410 Blast hits to 406 proteins in 18 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 408; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (415 aa)
           
  0.641
AT3G26590
MATE efflux family protein; Its function is described as antiporter activity, drug transmembrane transporter activity, transporter activity; Involved in drug transmembrane transport, transmembrane transport; Located in plasma membrane, vacuole, membrane; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Multi antimicrobial extrusion protein MatE (InterPro-IPR002528); BEST Arabidopsis thaliana protein match is- MATE efflux family protein (TAIR-AT5G38030.1); Has 11119 Blast hits to 11024 proteins in 1994 species- Archae - 242; B [...] (500 aa)
           
  0.569
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]