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RPS15A protein (Arabidopsis thaliana) - STRING interaction network
"RPS15A" - Ribosomal protein S15A in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPS15ARibosomal protein S15A (130 aa)    
Predicted Functional Partners:
RPS11-BETA
Ribosomal protein S11-beta (159 aa)
   
  0.999
AT2G36160
40S ribosomal protein S14-1 (150 aa)
   
  0.999
AT3G43980
40S ribosomal protein S29 (56 aa)
   
  0.999
RPS18C
S18 ribosomal protein; Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA (152 aa)
   
  0.999
AT3G45030
40S ribosomal protein S20-1 (124 aa)
   
  0.999
AT3G11510
40S ribosomal protein S14-2 (150 aa)
   
  0.999
RPS5B
Ribosomal protein 5B (207 aa)
   
  0.999
AT5G15200
Ribosomal protein S4 (198 aa)
   
  0.999
PFL
POINTED FIRST LEAVES (152 aa)
   
  0.999
EMB1080
Embryo defective 1080 (160 aa)
   
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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