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AT1G07920 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G07920" - GTP binding Elongation factor Tu family protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G07920GTP binding Elongation factor Tu family protein; Its function is described as calmodulin binding, translation elongation factor activity; Involved in translational elongation; Located in mitochondrion, vacuole; Expressed in cotyledon, male gametophyte, guard cell, juvenile leaf, leaf; Expressed during seedling growth; Contains the following InterPro domains- Translation elongation factor EFTu/EF1A, C-terminal (InterPro-IPR004160), Translation elongation factor EFTu/EF1A, domain 2 (InterPro-IPR004161), Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal (InterPro-I [...] (449 aa)    
Predicted Functional Partners:
AT1G09640
Translation elongation factor EF1B, gamma chain; Probably plays a role in anchoring the complex to other cellular components (414 aa)
     
 
  0.996
AT1G57720
Translation elongation factor EF1B, gamma chain; Probably plays a role in anchoring the complex to other cellular components (413 aa)
     
 
  0.995
AT3G04840
Ribosomal protein S3Ae; Its function is described as structural constituent of ribosome; Involved in translation; Located in cytosolic small ribosomal subunit, cytosolic ribosome, plasma membrane, chloroplast; Expressed in 27 plant structures; Expressed during 16 growth stages; Contains the following InterPro domains- Ribosomal protein S3Ae, conserved site (InterPro-IPR018281), Ribosomal protein S3Ae (InterPro-IPR001593); BEST Arabidopsis thaliana protein match is- Ribosomal protein S3Ae (TAIR-AT4G34670.1); Has 1367 Blast hits to 1362 proteins in 410 species- Archae - 234; Bacteria - 1 [...] (262 aa)
     
 
  0.990
AT4G34670
Ribosomal protein S3Ae; Its function is described as structural constituent of ribosome; Involved in translation; Located in 6 components; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein S3Ae, conserved site (InterPro-IPR018281), Ribosomal protein S3Ae (InterPro-IPR001593); BEST Arabidopsis thaliana protein match is- Ribosomal protein S3Ae (TAIR-AT3G04840.1); Has 1362 Blast hits to 1357 proteins in 408 species- Archae - 234; Bacteria - 1; Metazoa - 463; Fungi - 247; Plants - 191; Viruses - 0; Other Eukaryot [...] (262 aa)
     
 
  0.990
AT4G16720
Ribosomal protein L23/L15e family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, plasma membrane; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Ribosomal protein L15e (InterPro-IPR000439), Ribosomal protein L23/L15e, core (InterPro-IPR012678), Ribosomal protein L15e, conserved site (InterPro-IPR020925); BEST Arabidopsis thaliana protein match is- Ribosomal protein L23/L15e family protein (TAIR-AT4 [...] (204 aa)
   
 
  0.987
AT4G17390
Ribosomal protein L23/L15e family protein; Its function is described as structural constituent of ribosome; Involved in translation; Located in ribosome, cytosolic large ribosomal subunit, nucleolus, membrane; Expressed in 25 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Ribosomal protein L15e (InterPro-IPR000439), Ribosomal protein L23/L15e, core (InterPro-IPR012678), Ribosomal protein L15e, conserved site (InterPro-IPR020925); BEST Arabidopsis thaliana protein match is- Ribosomal protein L23/L15e family protein (TAIR-AT4G16720.1); Has 1 [...] (204 aa)
   
 
  0.987
ATARCA
Transducin/WD40 repeat-like superfamily protein; Major component of the RACK1 regulatory proteins that play a role in multiple signal transduction pathways. Involved in multiple hormone responses and developmental processes. MAPK cascade scaffolding protein involved in the protease IV and ArgC signaling pathway but not the flg22 pathway; Belongs to the WD repeat G protein beta family. Ribosomal protein RACK1 subfamily (327 aa)
     
 
  0.982
RPS6A
40S ribosomal protein S6-1; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (250 aa)
     
 
  0.982
EMB3010
40S ribosomal protein S6-2; May play an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (249 aa)
     
 
  0.981
LOS1
Ribosomal protein S5/Elongation factor G/III/V family protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity). Involved in cold responses leading to freezing tolerance via the inductio [...] (843 aa)
 
 
  0.980
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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