STRINGSTRING
AT1G07940.1 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G07940.1" - Elongation factor 1-alpha in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G07940.1Elongation factor 1-alpha (449 aa)    
Predicted Functional Partners:
AT1G57720
Elongation factor EF-1 gamma subunit; Probably plays a role in anchoring the complex to other cellular components (413 aa)
     
 
  0.994
AT1G09640
Elongation factor EF-1 gamma subunit; Probably plays a role in anchoring the complex to other cellular components (414 aa)
     
 
  0.994
AT5G02870
60S ribosomal protein L4-2 (407 aa)
     
 
  0.961
AT3G09630
60S ribosomal protein L4-1 (406 aa)
     
 
  0.953
AT2G18110
Elongation factor 1-delta 2; EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP (231 aa)
     
 
  0.952
AT5G19510
Elongation factor 1-beta 2; EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP (224 aa)
     
 
  0.951
EMB2207
Ribosomal protein 1 (389 aa)
     
 
  0.950
AT5G12110
Elongation factor 1-beta 1; EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP (228 aa)
     
 
  0.950
eEF-1Bb1
Elongation factor 1-delta 1; EF-1-beta and EF-1-delta stimulate the exchange of GDP bound to EF-1-alpha to GTP (260 aa)
     
 
  0.950
RPL3B
R-protein L3 B (390 aa)
     
 
  0.946
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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