STRINGSTRING
AT1G07970 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G07970" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G07970Uncharacterized protein (693 aa)    
Predicted Functional Partners:
AT3G45093
Defensin-like protein 255 (80 aa)
           
  0.809
NF-YC10
Nuclear factor Y, subunit C10 (206 aa)
           
  0.809
SCE1
Sumo conjugation enzyme 1; SUMO-conjugating enzyme that accepts the SUMO proteins from the E1 SUMO-activating heterodimer SAE1/SAE2 and catalyzes its covalent attachment to other proteins with the E3 SUMO ligases SIZ1 and MMS21. Associates with SIZ1 for sumoylation of the transcription factor GTE3 (160 aa)
       
      0.672
AT4G35610
Zinc finger (C2H2 type) family protein (271 aa)
           
  0.671
CRK15
Cysteine-rich receptor-like protein kinase 15 (507 aa)
           
  0.671
AT4G05553
Zinc knuckle (CCHC-type) family protein (111 aa)
           
  0.671
AT3G19620
Putative beta-D-xylosidase 5 (781 aa)
           
  0.671
AT2G43865
Uncharacterized protein (101 aa)
           
  0.671
AT1G54215
Proline-rich family protein (169 aa)
           
  0.671
AT1G15830
Uncharacterized protein (483 aa)
           
  0.671
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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