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AT1G07970 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G07970" - Cytochrome B561, amino-terminal protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AT1G07970Cytochrome B561, amino-terminal protein; Contains the following InterPro domains- Cytochrome B561-related, N-terminal (InterPro-IPR019176); Has 215 Blast hits to 213 proteins in 79 species- Archae - 0; Bacteria - 6; Metazoa - 131; Fungi - 22; Plants - 42; Viruses - 0; Other Eukaryotes - 14 (source- NCBI BLink) (693 aa)    
Predicted Functional Partners:
PUM24
Pumilio homolog 24; Encodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3’ UTR of target mRNA transcripts (641 aa)
     
        0.908
AT4G32910
Nuclear pore complex protein NUP85; Functions as component of the nuclear pore complex (NPC) (716 aa)
     
        0.905
APC4
Transducin/WD40 repeat-like superfamily protein; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the contr [...] (777 aa)
     
        0.905
SMC2
Structural maintenance of chromosomes protein 2-1; Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. Also involved in chromosome segregation in meiosis (1175 aa)
     
        0.879
ATSMC2
Structural maintenance of chromosomes (SMC) family protein; Central component of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases. Also involved in chromosome segregation in meiosis (1171 aa)
     
        0.879
AT4G35610
Zinc finger (C2H2 type) family protein; Its function is described as sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription; Located in nucleus; Contains the following InterPro domains- Zinc finger, C2H2-like (InterPro-IPR015880), Zinc finger, C2H2-type (InterPro-IPR007087); BEST Arabidopsis thaliana protein match is- zinc finger (C2H2 type) family protein (TAIR-AT4G35700.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- N [...] (271 aa)
           
  0.839
AT4G05553
Zinc knuckle (CCHC-type) family protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (111 aa)
           
  0.839
AT2G43865
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in cellular_component unknown; Has 2 Blast hits to 2 proteins in 1 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (101 aa)
           
  0.839
AT1G54215
Proline-rich family protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Has 103183 Blast hits to 42587 proteins in 2006 species- Archae - 171; Bacteria - 19191; Metazoa - 36983; Fungi - 10058; Plants - 17697; Viruses - 3627; Other Eukaryotes - 15456 (source- NCBI BLink) (169 aa)
           
  0.839
AT1G15830
Unknown protein; Has 165982 Blast hits to 57214 proteins in 2459 species- Archae - 263; Bacteria - 44622; Metazoa - 55751; Fungi - 10656; Plants - 17613; Viruses - 2527; Other Eukaryotes - 34550 (source- NCBI BLink) (483 aa)
           
  0.839
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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