STRINGSTRING
AT1G08340 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G08340" - Rho GTPase activating protein with PAK-box/P21-Rho-binding domain in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G08340Rho GTPase activating protein with PAK-box/P21-Rho-binding domain; Acts as a GTPase activator for the Rac-type GTPase by converting it to an inactive GDP-bound state (331 aa)    
Predicted Functional Partners:
ROPGEF7
RHO guanyl-nucleotide exchange factor 7; Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP. In postembryonic roots, modulates root stem cell maintenance by regulating the expression of PLT1 and PLT2, which are key transcription factors that mediate the patterning of the root stem cell niche. May connect RopGEF-regulated Rac/Rop signaling and auxin-dependent PLT-regulated root pattern formation (546 aa)
           
  0.742
AT1G56720
Protein kinase (492 aa)
       
 
  0.713
AT1G09440
Protein kinase family protein (466 aa)
       
 
  0.713
RBK2
ROP binding protein kinase 2 (460 aa)
       
 
  0.712
AT4G17245
RING/U-box superfamily protein (166 aa)
           
  0.710
RBK1
ROP binding protein kinase 1 (467 aa)
       
 
  0.555
IQD10
IQ-domain 10 (259 aa)
           
  0.503
MDO1
Uncharacterized protein; Required for the maintenance of meristems and stem cells through the reduction of DNA damage (PubMed-21781195). Promotes telomere integrity by maintaining telomere length and proper architecture of the chromosome terminus (PubMed-23572541). Negatively regulates telomerase repeat addition processivity (PubMed-23572541). Hampers contacts between enzymatically active telomerase and CST complex (PubMed-25329641) (127 aa)
           
  0.499
AT1G72220
RING-H2 finger protein ATL54 (413 aa)
           
  0.493
RIP3
ROP interactive partner 3; ROP effector binding specifically activated ROPs and linking them to the microtubule cytoskeleton. Involved in ROP- regulated polar growth. Involved in local disassembly of cortical microtubules when associated with ARAC10 and conversely mediates also the elimination of ARAC10 from the plasma membrane by the cortical microtubules. Accumulates at the plus end of shrinking microtubules (396 aa)
           
  0.480
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (11%) [HD]