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AT1G08580 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G08580" - Uncharacterized protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G08580Uncharacterized protein (123 aa)    
Predicted Functional Partners:
AT5G08180
H/ACA ribonucleoprotein complex subunit 2-like protein; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs (By similarity) (156 aa)
     
        0.827
HDT4
Histone deacetylase HDT4; Probably mediates the deacetylation of lysine residues lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events (203 aa)
     
        0.825
AT3G13230
RNA-binding protein PNO1 (215 aa)
     
        0.813
HDA3
Histone deacetylase 3; Probably mediates the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Required for histone H3 ’Lys-9’ deacetylation. Involved in rRNA gene silencing in nucleolar dominance. Seems to be implicated in the regulation of genes involved in seeds development (245 aa)
     
        0.812
AT5G20160
U4/U6 small nuclear ribonucleoprotein SNU13 (160 aa)
     
        0.807
ROC2
Rotamase cyclophilin 2; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (176 aa)
     
        0.806
AT3G06680
60S ribosomal protein L29-2 (83 aa)
     
        0.802
AT3G52040
Uncharacterized protein (90 aa)
     
        0.799
AT2G39390
60S ribosomal protein L35-2 (123 aa)
     
        0.799
AT2G20450
Ribosomal protein L14 (134 aa)
     
        0.789
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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