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AT1G08610 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G08610" - Pentatricopeptide repeat-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G08610Pentatricopeptide repeat-containing protein (559 aa)    
Predicted Functional Partners:
AT1G50920
Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (671 aa)
     
        0.629
AT2G37230
Pentatricopeptide repeat-containing protein (757 aa)
     
     
0.497
MGP3
Male gametophyte defective 3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (983 aa)
     
 
  0.492
GLT1
Glutamate synthase 1 [NADH]; Involved in glutamate biosynthesis. Required for non- photorespiratory ammonium assimilation. Probably involved in primary ammonium assimilation in roots (2208 aa)
     
   
  0.482
AT5G39840
Putative ATP-dependent RNA helicase; Major helicase player in mitochondrial RNA metabolism. Component of the mitochondrial degradosome (mtEXO) complex, that degrades 3’ overhang double-stranded RNA with a 3’-to-5’ directionality in an ATP-dependent manner. ATPase and ATP- dependent multisubstrate helicase, able to unwind double-stranded (ds) DNA and RNA, and RNA/DNA heteroduplexes in the 5’-to-3’ direction. Plays a role in the RNA surveillance system in mitochondria; regulates the stability of mature mRNAs, the removal of aberrantly formed mRNAs and the rapid degradation of non coding [...] (776 aa)
     
   
  0.471
AT4G26600
S-adenosyl-L-methionine-dependent methyltransferase-like protein (671 aa)
     
        0.466
EDA25
Embryo sac development arrest 25 (1043 aa)
     
        0.460
AT2G19870
tRNA/rRNA methyltransferase (SpoU)-like protein (589 aa)
     
        0.454
SURF1
SURFEIT 1; Probably involved in the biogenesis of the COX complex (354 aa)
     
   
  0.449
AT1G48510
Surfeit locus 1 cytochrome c oxidase biogenesis protein; May be involved in the biogenesis of the COX complex (384 aa)
     
   
  0.449
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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