STRINGSTRING
RBOHB protein (Arabidopsis thaliana) - STRING interaction network
"RBOHB" - Respiratory burst oxidase-B in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBOHBRespiratory burst oxidase-B; Calcium-dependent NADPH oxidase that generates superoxide (843 aa)    
Predicted Functional Partners:
LAC5
Laccase 5; Lignin degradation and detoxification of lignin-derived products (580 aa)
     
 
  0.579
LAC3
Laccase 3; Lignin degradation and detoxification of lignin-derived products (570 aa)
     
 
  0.562
sks17
SKU5 similar 17 (546 aa)
     
 
  0.552
LAC17
Laccase 17; Lignin degradation and detoxification of lignin-derived products (577 aa)
     
 
  0.552
LAC16
Laccase 16; Lignin degradation and detoxification of lignin-derived products (523 aa)
     
 
  0.552
SKS2
SKU5 similar 2 (592 aa)
     
 
  0.552
sks3
SKU5 similar 3 (621 aa)
     
 
  0.552
TT10
Laccase-15; Lignin degradation and detoxification of lignin-derived products (By similarity). Involved in lignin synthesis in seed coats, in seed coat permeability, in seed germination, and in root elongation. Required for the seed coat (testa) brown pigmentation by mediating the polymerization of proanthocyanidin (tannin) from its monomer precursor epicatechin. Promotes sligthly seed dormancy (565 aa)
     
 
  0.552
AT5G21105
L-ascorbate oxidase (588 aa)
     
 
  0.552
AT5G21100
L-ascorbate oxidase (573 aa)
     
 
  0.552
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (15%) [HD]