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AT1G09130 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G09130" - ATP-dependent caseinolytic in Arabidopsis thaliana
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second shell of interactors
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proteins of unknown 3D structure
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
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gene co-occurrence
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textmining
co-expression
protein homology
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AT1G09130ATP-dependent caseinolytic (Clp) protease/crotonase family protein; Its function is described as serine-type endopeptidase activity; Involved in proteolysis; Located in mitochondrion, chloroplast stroma; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Peptidase S14, ClpP (InterPro-IPR001907); BEST Arabidopsis thaliana protein match is- CLP protease proteolytic subunit 1 (TAIR-AT1G49970.1) (370 aa)    
Predicted Functional Partners:
AT4G25370
ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic; Accessory protein regulating the assembly of the plastidial Clp protease system. CLPT1 first binds to the heptameric P-ring containing the CLP3-6 subunits followed by CLPT2, and only then does the P-ring combine with the R-ring composed of the clpP1 and CLPR1-4 subunits. Once the core complex is fully assembled, it then associates to the CLPC chaperone partner to form the functional protease. CLPT1 and CLPT2 are partially redundant (238 aa)
     
 
  0.957
AT4G12060
ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic; Accessory protein regulating the assembly of the plastidial Clp protease system. CLPT1 first binds to the heptameric P-ring containing the CLP3-6 subunits followed by CLPT2, and only then does the P-ring combine with the R-ring composed of the clpP1 and CLPR1-4 subunits. Once the core complex is fully assembled, it then associates to the CLPC chaperone partner to form the functional protease. CLPT2 and CLPT1 are partially redundant (241 aa)
     
 
  0.942
CLPX
CLP protease regulatory subunit CLPX1, mitochondrial; ATP-dependent specificity component of the mitochondrial Clp protease. It directs the protease to specific substrates (By similarity). Can perform chaperone functions in the absence of ClpP (By similarity) (579 aa)
 
 
  0.920
AT1G33360
CLP protease regulatory subunit CLPX3, mitochondrial; ATP-dependent specificity component of the mitochondrial Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (656 aa)
 
 
  0.896
AT5G49840
CLP protease regulatory subunit CLPX2, mitochondrial; ATP-dependent specificity component of the mitochondrial Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP (608 aa)
 
 
  0.895
CLPR4
ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic; Involved in plastid protein homeostasis; Belongs to the peptidase S14 family (305 aa)
   
 
0.858
AT1G68660
Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein; Small adapter protein that modulate the activity of CLPC (By similarity). Involved in plastid biogenesis in particular when chloroplast protein synthesis capacity is a limiting factor. Probably involved in substrate selection for plastid Clp protease system. Recruitment to ClpC chaperones is facilitated by CLPF thus forming a binary adapter for selective substrate recognition and delivery to plastid Clp protease system (CLPC) (159 aa)
     
   
  0.813
CLPR1
ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic; Encodes a ClpP-related sequence. Though similar to ClpP proteins, this does not contains the highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp). The name reflects nomenclature described in Adam et. al (2001) (387 aa)
   
   
0.810
AT1G60230
Uncharacterized protein At1g60230; Radical SAM superfamily protein; Its function is described as iron-sulfur cluster binding, catalytic activity, RNA methyltransferase activity; Involved in rRNA processing; Located in cytoplasm; Expressed in 6 plant structures; Expressed during LP.04 four leaves visible, petal differentiation and expansion stage, E expanded cotyledon stage; Contains the following InterPro domains- Elongator protein 3/MiaB/NifB (InterPro-IPR006638), Ribosomal RNA large subunit methyltransferase RlmN; (InterPro-IPR004383), Radical SAM (InterPro-IPR007197); BEST Arabidops [...] (458 aa)
   
        0.791
AT2G02050
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity) (103 aa)
     
        0.751
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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