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STRINGSTRING
AT1G09310 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G09310" - Protein of unknown function, DUF538 in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AT1G09310Protein of unknown function, DUF538; Involved in biological_process unknown; Located in apoplast; Expressed in 22 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Protein of unknown function DUF538 (InterPro-IPR007493); BEST Arabidopsis thaliana protein match is- Protein of unknown function, DUF538 (TAIR-AT1G56580.1); Has 409 Blast hits to 409 proteins in 33 species- Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 4; Plants - 403; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (179 aa)    
Predicted Functional Partners:
AT3G19430
Late embryogenesis abundant protein-related / LEA protein-related; Contains the following InterPro domains- Root cap (InterPro-IPR009646); BEST Arabidopsis thaliana protein match is- Late embryogenesis abundant (LEA) protein-related (TAIR-AT5G60520.1); Has 407828 Blast hits to 124211 proteins in 3571 species- Archae - 1492; Bacteria - 100012; Metazoa - 145570; Fungi - 58500; Plants - 39690; Viruses - 10531; Other Eukaryotes - 52033 (source- NCBI BLink) (559 aa)
           
  0.837
LUG
LisH dimerisation motif;WD40/YVTN repeat-like-containing domain; Transcription repressor subunit of the SEU-LUG transcriptional corepressor of the C class floral homeotic gene AGAMOUS during the early stages of floral meristem development. Is part of the A class cadastral complex that define the boundaries between the A and C class homeotic genes expression and function. Interacts together with APETALA2 and SEUSS to repress AGAMOUS expression. Also plays a role in ovule and pollen development. Implicated in embryo and floral development. Involved in post- synthesis cell wall modificati [...] (969 aa)
           
  0.726
RD22
BURP domain-containing protein; Acts to suppress chlorophyll degradation under moisture stress (392 aa)
     
        0.684
AT5G62330
BEST Arabidopsis thaliana protein match is- Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR-AT5G62340.1); Has 9 Blast hits to 9 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (170 aa)
           
  0.625
AT2G01610
Plant invertase/pectin methylesterase inhibitor superfamily protein; Its function is described as enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity; Involved in biological_process unknown; Located in endomembrane system; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Pectinesterase inhibitor (InterPro-IPR006501); BEST Arabidopsis thaliana protein match is- Plant invertase/pectin methylesterase inhibitor superfamily protein (TAIR-AT1G14890.1); Has 850 Blast hits to 843 proteins in 42 speci [...] (222 aa)
           
  0.625
AT3G28310
Protein of unknown function (DUF677); Contains the following InterPro domains- Protein of unknown function DUF677 (InterPro-IPR007749); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF677) (TAIR-AT3G28290.1); Has 57 Blast hits to 57 proteins in 3 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (103 aa)
           
  0.619
LP1
Non-specific lipid transfer protein. Binds calmodulin in a Ca2+-independent manner. Localized to the cell wall. Specifically expressed in L1 epidermal layer. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members- At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15 (118 aa)
     
        0.608
CWLP
Cell wall-plasma membrane linker protein homolog (CWLP) (334 aa)
     
   
  0.599
AT2G25150
HXXXD-type acyl-transferase family protein; Spermidine coumaroyl-CoA acyltransferase that mediates the conversion of spermidine into dicoumaroyl-spermidine (461 aa)
           
  0.576
AT5G04970
Plant invertase/pectin methylesterase inhibitor superfamily; Acts in the modification of cell walls via demethylesterification of cell wall pectin; In the C-terminal section; belongs to the pectinesterase family (624 aa)
           
  0.556
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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