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AT1G09320 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G09320" - Agenet domain-containing protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G09320Agenet domain-containing protein; Its function is described as RNA binding; Involved in biological_process unknown; Located in chloroplast; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Tudor-like, plant (InterPro-IPR014002), Agenet (InterPro-IPR008395); BEST Arabidopsis thaliana protein match is- agenet domain-containing protein (TAIR-AT3G06520.1); Has 769 Blast hits to 316 proteins in 28 species- Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 3; Plants - 733; Viruses - 0; Other Eukaryotes - 20 (source- NCBI BLink) (517 aa)    
Predicted Functional Partners:
EML3
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; Probably involved in the regulation of chromatin states (Probable). Contributes to basal immunity (397 aa)
           
  0.791
EML2
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; Probably involved in the regulation of chromatin states (Probable). Contributes to RPP7-mediated and basal immunity, especially against Hyaloperonospora arabidopsidis isolate Hiks1. Regulates negatively EDM2-dependent floral transition (320 aa)
           
  0.775
WUS
Homeodomain-like superfamily protein; Transcription factor that plays a central role during early embryogenesis, oogenesis and flowering, probably by regulating expression of specific genes. Required to specify stem cell identity in meristems, such as shoot apical meristem (SAM). May induce shoot stem cells activity in order to maintain the stem cell identity. Involved in the developmental root meristem. In shoot apices, it is sufficient to induce the expression of CLV3, a putative ligand of the CLV signaling pathway. Also required to sustain organogenesis in the floral meristem by con [...] (292 aa)
           
  0.686
SGF29a
SGF29 tudor-like domain; Contains the following InterPro domains- SAGA-associated factor 29 (InterPro-IPR010750); BEST Arabidopsis thaliana protein match is- SGF29 tudor-like domain (TAIR-AT5G40550.2); Has 319 Blast hits to 319 proteins in 150 species- Archae - 0; Bacteria - 0; Metazoa - 122; Fungi - 112; Plants - 46; Viruses - 0; Other Eukaryotes - 39 (source- NCBI BLink) (270 aa)
           
  0.658
EML1
Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; Probably involved in the regulation of chromatin states (Probable). Contributes to RPP7-mediated and basal immunity, especially against Hyaloperonospora arabidopsidis isolate Hiks1. Regulates negatively EDM2-dependent floral transition (383 aa)
           
  0.644
CDT1B
Homolog of yeast CDT1 B homolog of yeast CDT1 B; Member of the pre-replication complex. Regulates endoreduplication. Involved in the coordination of cell and plastid division (486 aa)
           
  0.624
LPPgamma
Phosphatidic acid phosphatase (PAP2) family protein; Exhibits phosphatidate phosphatase (PAP) activity in vitro. May play a primary role as PAP in plastids; Belongs to the PA-phosphatase related phosphoesterase family (226 aa)
           
  0.580
ABAP1
ARMADILLO BTB ARABIDOPSIS PROTEIN 1; May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). In association with TCP24, exerts a negative role in cell proliferation in leaves, possibly by inhibiting mitotic DNA replication (737 aa)
           
  0.559
Tudor1
Ribonuclease TUDOR 1; Cytoprotective ribonuclease (RNase) required for resistance to abiotic stresses, acting as a positive regulator of mRNA decapping during stress. Essential for the integrity and function of cytoplasmic messenger ribonucleoprotein (mRNP) complexes called stress granules (SGs) and processing bodies (PBs), sites of post-transcriptional gene regulation during stress (e.g. salt and heat). Involved in gibberellic acid (GA) biosynthesis. Essential for stress tolerance, probably by regulating mRNAs entering the secretory pathway. Component of stress granules (SGs) that reg [...] (1007 aa)
           
  0.535
AT5G52070
Uncharacterized protein At5g52070; Agenet domain-containing protein; Its function is described as RNA binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Tudor-like, plant (InterPro-IPR014002), Agenet (InterPro-IPR008395); BEST Arabidopsis thaliana protein match is- Agenet domain-containing protein (TAIR-AT5G42670.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5 [...] (271 aa)
           
  0.526
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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