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AT1G09650 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G09650" - F-box/LRR and kelch-repeat containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G09650F-box/LRR and kelch-repeat containing protein (382 aa)    
Predicted Functional Partners:
AT5G21950
Hydrolase, alpha/beta fold family protein (308 aa)
     
   
  0.442
AT5G14530
transducin/WD40 domain-containing protein (330 aa)
     
   
  0.422
AT2G25950
Uncharacterized protein (204 aa)
     
   
  0.422
AT1G19330
Uncharacterized protein (248 aa)
     
   
  0.414
AT1G72550
phenylalanyl-tRNA synthetase beta chain (598 aa)
     
   
  0.409
AT4G37500
Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding protein (124 aa)
           
  0.408
AT4G14900
FRIGIDA-like protein (532 aa)
           
  0.408
AT3G25680
Uncharacterized protein (558 aa)
           
  0.408
AT2G15270
Uncharacterized protein (194 aa)
           
  0.408
AT1G73760
RING/U-box superfamily protein (367 aa)
           
  0.408
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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