STRINGSTRING
COBL6 protein (Arabidopsis thaliana) - STRING interaction network
"COBL6" - COBRA-like protein 6 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COBL6COBRA-like protein 6 (454 aa)    
Predicted Functional Partners:
LCR59
Defensin-like protein 182; Confers broad-spectrum resistance to pathogens (129 aa)
     
   
  0.737
AT3G29830
F-box domain-containing protein (464 aa)
           
  0.678
AT3G19370
Uncharacterized protein (704 aa)
           
  0.678
SVL3
SHV3-like 3 (729 aa)
     
   
  0.649
AT1G18280
Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like protein (180 aa)
           
  0.636
AT5G40510
Sucrase/ferredoxin-like family protein (333 aa)
           
  0.606
RALFL18
Ralf-like 18; Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity) (103 aa)
           
  0.600
AT3G49270
Uncharacterized protein (152 aa)
     
   
  0.572
LLG3
LORELEI-LIKE-GPI ANCHORED PROTEIN 3 (160 aa)
           
  0.560
AT4G16146
cAMP-regulated phosphoprotein 19-related protein (102 aa)
           
  0.558
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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