• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G09935 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G09935" - Phosphoglycerate mutase family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G09935Phosphoglycerate mutase family protein; Its function is described as catalytic activity; Involved in metabolic process; Located in cellular_component unknown; Contains the following InterPro domains- Histidine phosphatase superfamily, clade-1 (InterPro-IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro-IPR001345); BEST Arabidopsis thaliana protein match is- Phosphoglycerate mutase family protein (TAIR-AT1G58280.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Ot [...] (231 aa)    
Predicted Functional Partners:
AT1G09870
Histidine acid phosphatase family protein; Its function is described as acid phosphatase activity; Involved in biological_process unknown; Located in plasma membrane; Expressed in 25 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Histidine phosphatase superfamily, clade-2 (InterPro-IPR000560), Histidine acid phosphatase, eukaryotic (InterPro-IPR016274); Has 765 Blast hits to 755 proteins in 231 species- Archae - 0; Bacteria - 126; Metazoa - 192; Fungi - 356; Plants - 52; Viruses - 0; Other Eukaryotes - 39 (source- NCBI BLink) (487 aa)
     
        0.576
AT2G35040
AICARFT/IMPCHase bienzyme family protein; Its function is described as phosphoribosylaminoimidazolecarboxamide formyltransferase activity, IMP cyclohydrolase activity, catalytic activity; Involved in response to cold, purine nucleotide biosynthetic process; Located in stromule, chloroplast, chloroplast stroma; Expressed in 23 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- AICARFT/IMPCHase bienzyme, transformylase domain (InterPro-IPR013982), AICARFT/IMPCHase bienzyme (InterPro-IPR002695), MGS-like (InterPro-IPR011607); Has 10802 Blast hits [...] (596 aa)
       
 
  0.513
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]