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AT1G10040 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G10040" - alpha/beta-Hydrolases superfamily protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G10040alpha/beta-Hydrolases superfamily protein; Contains the following InterPro domains- Protein of unknown function DUF676, hydrolase-like (InterPro-IPR007751); BEST Arabidopsis thaliana protein match is- alpha/beta-Hydrolases superfamily protein (TAIR-AT4G25770.1); Has 823 Blast hits to 815 proteins in 221 species- Archae - 0; Bacteria - 56; Metazoa - 168; Fungi - 260; Plants - 184; Viruses - 0; Other Eukaryotes - 155 (source- NCBI BLink) (412 aa)    
Predicted Functional Partners:
AT1G10320
Zinc finger C-x8-C-x5-C-x3-H type family protein; Its function is described as RNA binding, nucleotide binding, zinc ion binding, nucleic acid binding; Located in nucleus; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Zinc finger, CCCH-type (InterPro-IPR000571), RNA recognition motif, RNP-1 (InterPro-IPR000504), Nucleotide-binding, alpha-beta plait (InterPro-IPR012677), RNA recognition, domain 1 (InterPro-IPR003954), U2 auxiliary factor small subunit (InterPro-IPR009145); BEST Arabidopsis thaliana protein match is- U2 snRN [...] (757 aa)
           
  0.666
AT1G10180
Exocyst complex component EXO84C; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane during regulated or polarized secretion. Involved in polarized cell growth and organ morphogenesis. During cytokinesis, involved in cell plate initiation, cell plate maturation and formation of new primary cell wall (By similarity) (769 aa)
           
  0.644
AT1G59725
DNAJ heat shock family protein; Its function is described as unfolded protein binding, heat shock protein binding; Involved in protein folding; Located in cellular_component unknown; Expressed in root; Contains the following InterPro domains- Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro-IPR015609), HSP40/DnaJ peptide-binding (InterPro-IPR008971), Chaperone DnaJ, C-terminal (InterPro-IPR002939), Heat shock protein DnaJ, N-terminal (InterPro-IPR001623), Heat shock protein DnaJ (InterPro-IPR003095), Heat shock protein DnaJ, conserved site (InterPro-IPR018253); BEST Arabi [...] (331 aa)
       
 
  0.584
DL3
Dynamin-like 3; A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain. DRP2B and DRP1A participate together in clathrin-coated vesicle formation during endocytosis (920 aa)
       
 
  0.584
AT1G10350
DNAJ heat shock family protein; Its function is described as unfolded protein binding, heat shock protein binding; Involved in protein folding; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro-IPR015609), HSP40/DnaJ peptide-binding (InterPro-IPR008971), Chaperone DnaJ, C-terminal (InterPro-IPR002939), Heat shock protein DnaJ, N-terminal (InterPro-IPR001623), Heat shock protein DnaJ (InterPro-IPR003095), Heat shock protein Dna [...] (349 aa)
       
 
  0.584
ADL6
Dynamin-like protein 6; Microtubule-associated force-producing protein involved in clathrin-mediated vesicle trafficking from the trans-Golgi network to the central vacuole. Able to bind and hydrolyze GTP. Binds specifically to phosphatidylinositol 3-phosphate (PtdIns3P); Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family (914 aa)
       
 
  0.584
RAD51C
RAS associated with diabetes protein 51C; Encodes a protein similar to RAD51C involved in double stranded break repair via homologous recombination. Sensitive to DSB induced by Mitomycin C and gamma irradiation, interacts with Atxrcc3 in yeast two-hybrid assay. Required for female meiosis but not critical for mitosis under normal conditions; Belongs to the RecA family. RAD51 subfamily (387 aa)
           
  0.583
SPO11-2
Meiotic recombination protein SPO11-2; Encodes AtSPO11-2, one of the three Arabidopsis homologues of the archaeal DNA topoisomerase VIA subunit (topo VIA). Required for meiotic recombination. Plants homozygous for atspo11-2 exhibit a severe sterility phenotype. Both male and female meiosis are severely disrupted in the atspo11-2 mutant, and this is associated with severe defects in synapsis during the first meiotic division and reduced meiotic recombination. AtSPO11-1 and AtSPO11-2 have overlapping functions (i.e. both required for meiotic recombination) whereas AtSPO11-3 functions [...] (383 aa)
           
  0.583
AT1G59660
Nuclear pore complex protein NUP98B; Nucleoporin autopeptidase; Its function is described as transporter activity; Involved in transport; Located in chloroplast, nuclear pore; Expressed in 16 plant structures; Expressed during 7 growth stages; Contains the following InterPro domains- Peptidase S59, nucleoporin (InterPro-IPR007230); BEST Arabidopsis thaliana protein match is- Nucleoporin autopeptidase (TAIR-AT1G10390.2); Has 64429 Blast hits to 28580 proteins in 1811 species- Archae - 118; Bacteria - 17184; Metazoa - 18465; Fungi - 12106; Plants - 2886; Viruses - 648; Other Eukaryotes - [...] (997 aa)
           
  0.581
AT1G10390
Nuclear pore complex protein NUP98A; Nucleoporin autopeptidase; Its function is described as transporter activity; Involved in transport; Located in chloroplast, nuclear pore; Expressed in 24 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Peptidase S59, nucleoporin (InterPro-IPR007230); BEST Arabidopsis thaliana protein match is- Nucleoporin autopeptidase (TAIR-AT1G59660.1); Has 77624 Blast hits to 32376 proteins in 1819 species- Archae - 124; Bacteria - 21147; Metazoa - 21029; Fungi - 13994; Plants - 4522; Viruses - 746; Other Eukaryotes [...] (1041 aa)
           
  0.581
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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