STRINGSTRING
AT1G10140 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G10140" - Uncharacterized protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G10140Uncharacterized protein (167 aa)    
Predicted Functional Partners:
AT5G17980
C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (1049 aa)
           
  0.670
MARD1
Uncharacterized protein; Involved in seed dormancy control (263 aa)
           
  0.670
RNS2
Ribonuclease 2; May remobilize phosphate, particularly when cells senesce or when phosphate becomes limiting (259 aa)
           
  0.559
BCAT-2
Branched-chain amino acid transaminase 2; Converts 2-oxo acids to branched-chain amino acids. Shows activity with L-Leu, L-Ile and L-Val as amino donors and 2- oxoglutarate as an amino acceptor, but no activity for D-isomers of Leu, Ile, Val, Asp, Glu or Ala (388 aa)
     
        0.489
SAG13
Senescence-associated gene 13; Unspecific reductase providing both diastereomeric alcohols from the prochiral ketones. Active on cyclic monoterpenes and small flexible lipophilic carbonyls. No activity with tropinone, nitrogen-containing tropinone analogs, tropine or pseudotropine as substrate (269 aa)
           
  0.420
NAC055
NAC domain containing protein 3; Transcription factors that bind specifically to the 5’- CATGTG-3’ motif (317 aa)
     
        0.414
AT2G36950
Heavy-metal-associated domain-containing protein (386 aa)
     
        0.412
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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