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AT1G10190 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G10190" - NEP-interacting protein, putative in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
AT1G10190NEP-interacting protein, putative (DUF239); Protein of Unknown Function (DUF239); Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Contains the following InterPro domains- Protein of unknown function DUF239, plant (InterPro-IPR004314); BEST Arabidopsis thaliana protein match is- Protein of Unknown Function (DUF239) (TAIR-AT4G15050.1); Has 640 Blast hits to 606 proteins in 22 species- Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 4; Plants - 629; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (396 aa)    
Predicted Functional Partners:
AT4G15050
NEP-interacting protein, putative (DUF239); Protein of Unknown Function (DUF239); Involved in biological_process unknown; Located in endomembrane system; Contains the following InterPro domains- Protein of unknown function DUF239, plant (InterPro-IPR004314); BEST Arabidopsis thaliana protein match is- Protein of Unknown Function (DUF239) (TAIR-AT1G10190.1); Has 633 Blast hits to 604 proteins in 22 species- Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 6; Plants - 620; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (396 aa)
     
     
0.424
AT1G54445
Protein of unknown function (PD694200); Encodes a defensin-like (DEFL) family protein (78 aa)
     
        0.418
AT5G15000
Encodes a ECA1 gametogenesis related family protein (98 aa)
     
        0.416
AT5G32619
Encodes a defensin-like (DEFL) family protein (91 aa)
     
        0.400
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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