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AT1G10300 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G10300" - Nucleolar GTP-binding protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G10300Nucleolar GTP-binding protein; Involved in the biogenesis of the 60S ribosomal subunit (687 aa)    
Predicted Functional Partners:
AT5G04600
RNA recognition motif-containing protein (222 aa)
     
 
  0.999
AT3G23620
Ribosome production factor 2-like protein (314 aa)
     
 
  0.999
AT5G14520
Pescadillo-related protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (590 aa)
     
 
  0.998
AT4G34910
DEAD-box ATP-dependent RNA helicase 16 (626 aa)
     
 
  0.998
AT2G40360
transducin/WD-40 repeat-containing protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (753 aa)
     
 
  0.998
AT1G79150
Binding (830 aa)
     
 
  0.998
AT1G77030
DEAD-box helicase domain-containing protein (845 aa)
     
 
  0.998
AT2G18220
Noc2p family (764 aa)
     
 
  0.998
At3g55510
REBELOTE (594 aa)
     
 
  0.998
AT1G13160
ARM repeat superfamily protein (804 aa)
     
 
  0.998
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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