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AT1G10380 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G10380" - Putative membrane lipoprotein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G10380Putative membrane lipoprotein (305 aa)    
Predicted Functional Partners:
AT5G55530
Calcium-dependent lipid-binding domain-containing protein (405 aa)
           
  0.987
AT5G49250
Beta-galactosidase related protein (200 aa)
           
  0.987
AT4G01350
Cysteine/Histidine-rich C1 domain family protein (652 aa)
           
  0.987
AT3G60980
Pentatricopeptide repeat-containing protein (412 aa)
           
  0.878
PAI3
Phosphoribosylanthranilate isomerase 3 (244 aa)
           
  0.741
SOT18
Sulfotransferase 18; Sulfotransferase that utilizes 3’-phospho-5’-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the sulfate conjugation of desulfo-glucosinolates (dsGSs), the final step in the biosynthesis of the glucosinolate core structure. Preferred substrate are the long-chain desulfo-glucosinolates, 7- methylthioheptyl and 8-methylthiooctyl, derived from methionine. Substrate preference is desulfo-benzyl glucosinolate > desulfo-4- methylthiobutyl glucosinolate > desulfo-6-methylthiohexyl glucosinolate > desulfo-3-methylthiopropyl glucosinolate > desulfo-indol-3-yl methyl [...] (350 aa)
           
  0.677
AT1G29520
AWPM19-like protein (158 aa)
     
        0.444
AT5G40020
Pathogenesis-related thaumatin-like protein (256 aa)
     
        0.438
AT3G15250
Uncharacterized protein (226 aa)
     
        0.438
TED7
Tracheary element differentiation-related 7 (205 aa)
     
        0.437
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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