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emb2004 protein (Arabidopsis thaliana) - STRING interaction network
"emb2004" - Embryo defective 2004 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
emb2004Embryo defective 2004 (605 aa)    
Predicted Functional Partners:
MCM9
Minichromosome maintenance 9; Probable DNA helicase that may play a role in DNA repair during meiosis (646 aa)
     
      0.849
MCM2
MINICHROMOSOME MAINTENANCE 2; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells. May play a crucial role in the control of de-differentiation and cell proliferation processes required for lateral root formation. Is essential for embryo development. Is involved in the geminivirus mungbean yellow mosaic virus (MYMV) DNA replication, presumably in conjunction with other host factors (936 aa)
       
      0.842
EMB2279
EMBRYO DEFECTIVE 2279; May play a role in embryogenesis (1006 aa)
     
   
  0.804
emb2737
Embryo defective 2737 (459 aa)
     
   
  0.733
EMB506
Embryo defective 506; Involved in the initial differentiation of the proplastid during the embryo development. Also required for correct cotyledon, true leaf and cauline leaf margin development (315 aa)
     
 
  0.717
EMB2421
EMBRYO DEFECTIVE 2421 (709 aa)
     
   
  0.716
EMB1030
EMBRYO DEFECTIVE 1030; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain (978 aa)
     
   
  0.674
FTSH12
FTSH protease 12; Probable ATP-dependent zinc metallopeptidase (1008 aa)
     
   
  0.672
AT5G14710
Proteasome assembly chaperone 3 (124 aa)
           
  0.670
ALB1
ALBINA 1; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX. The magnesium-chelatase is a complex of three subunits, CHLI, CHLD and CHLH. The reaction takes place in two steps, with an ATP-dependent activation followed by an ATP- dependent chelation step. Does not bind abscisic acid (760 aa)
     
   
  0.618
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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