STRINGSTRING
AT1G10660 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G10660" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G10660Uncharacterized protein (320 aa)    
Predicted Functional Partners:
AT1G58420
Uncharacterized protein (179 aa)
           
  0.958
CKL11
Casein kinase I (457 aa)
           
  0.879
AT5G44520
Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate (296 aa)
           
  0.875
ARP5
Actin-related protein 5; Probable subunit of a chromatin-remodeling complex. Involved in DNA repair. Required for multicellular development of all organs (730 aa)
           
  0.875
AT1G04850
Ubiquitin-associated (UBA)/TS-N domain-containing protein (413 aa)
           
  0.806
LIL3:2
Chlorophyll A-B binding family protein (258 aa)
           
  0.670
UPM1
Urophorphyrin methylase 1 (369 aa)
           
  0.670
PCS2
Phytochelatin synthase 2; Involved in the synthesis of phytochelatins (PC) and homophytochelatins (hPC), the heavy-metal-binding peptides of plants (452 aa)
           
  0.634
AT4G11320
Putative cysteine proteinase (371 aa)
           
  0.597
EIF4G
Translation initiation factor eIF-4F; Component of the protein complex eIF4F, which is involved in the recognition of the mRNA cap, ATP-dependent unwinding of 5’-terminal secondary structure and recruitment of mRNA to the ribosome. Plays a role in the accumulation of some potyvirus during viral infection. Required for the accumulation of cucumber mosaic virus 3a protein and turnip crinkle virus p28 replication protein during viral infection. These proteins are necessary for cell-to-cell movement of the virus (1727 aa)
           
  0.504
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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