STRINGSTRING
AT1G10820 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G10820" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G10820Uncharacterized protein (258 aa)    
Predicted Functional Partners:
AT2G38090
Duplicated homeodomain-like superfamily protein (298 aa)
     
      0.643
AT5G58900
Homeodomain-like transcriptional regulator (288 aa)
       
      0.541
AT5G05790
Duplicated homeodomain-like superfamily protein (277 aa)
       
      0.541
AT5G04760
Duplicated homeodomain-like superfamily protein (215 aa)
       
      0.541
AT5G01200
Duplicated homeodomain-like superfamily protein (267 aa)
       
      0.541
RL1
RAD-like 1; Probable transcription factor (100 aa)
       
      0.541
AT3G11280
Duplicated SANT DNA-binding domain-containing protein (263 aa)
       
      0.541
MEE3
MATERNAL EFFECT EMBRYO ARREST 3; Probable transcription factor. Required for female gametophyte development (101 aa)
       
      0.541
TBL23
TRICHOME BIREFRINGENCE-LIKE 23; May be involved in the specific O-acetylation of cell wall polymers (432 aa)
     
        0.438
AT2G32840
Proline-rich family protein (337 aa)
     
        0.438
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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